RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PFKFB3Q16875 520 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 TMEM63BQ5T3F8 832 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 LVRNQ6Q4G3 990 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF66Q6ZN08 573 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 LRRTM4Q86VH4 590 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 ADGRG3Q86Y34 549 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 RFX6Q8HWS3 928 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 FSIP1Q8NA03 581 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 SRFBP1Q8NEF9 429 aaKnown RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 HERVK_113Q902F9 699 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 EIF2AK1Q9BQI3 630 aaKnown RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 GATA5Q9BWX5 397 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 MTMR4Q9NYA4 1195 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 RRP7AQ9Y3A4 280 aaKnown RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 KNSTRNQ9Y448 316 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 A0A1W2PP64 1363 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 NSD2O96028 1365 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 MST1RQ04912 1400 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 EDC4Q6P2E9 1401 aaKnown RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 ANP32CO43423 234 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 CNTN5O94779 1100 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 PCP4P48539 62 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 ELLP55199 621 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 CDK18Q07002 472 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 DHRS13Q6UX07 377 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 RINLQ6ZS11 566 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 RHPN2Q8IUC4 686 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 C16orf71Q8IYS4 520 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 PTGR2Q8N8N7 351 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 KCNJ9Q92806 393 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF764Q96H86 408 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 RBM17Q96I25 401 aaKnown RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 C5orf34Q96MH7 638 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 TWNKQ96RR1 684 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 SENP7Q9BQF6 1050 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 ABHD14AQ9BUJ0 271 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 HTATIP2Q9BUP3 242 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 TM2D2Q9BX73 214 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 HDHD5Q9BXW7 423 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 PRKRIP1Q9H875 184 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 TLR8Q9NR97 1041 aaKnown RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 TRPM3Q9HCF6 1732 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 C1orf167Q5SNV9 1468 aa5.5□□□□□ -1.53
HMGB3P19-201ENST00000403971 CGNL1Q0VF96 1302 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 USP6P35125 1406 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 SSH2Q76I76 1423 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 NHSL1Q5SYE7 1610 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 MARF1Q9Y4F3 1742 aaKnown RBP5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 LINC01548A6NM66 108 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 HNRNPRO43390 633 aaKnown RBP5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 CPA1P15085 419 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 ST6GAL1P15907 406 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 CCR5P51681 352 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 EFR3AQ14156 821 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 RALBP1Q15311 655 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 EXD3Q8N9H8 876 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 C8orf58Q8NAV2 365 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 SEMA6DQ8NFY4 1073 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 HASPINQ8TF76 798 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 DPF1Q92782 380 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 MAELQ96JY0 434 aaKnown RBP5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 FCRL5Q96RD9 977 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 TRIM2Q9C040 744 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 SFXN1Q9H9B4 322 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 PDGFCQ9NRA1 345 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 RASSF1Q9NS23 344 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 TMLHEQ9NVH6 421 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 PARD3Q8TEW0 1356 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 ALS2Q96Q42 1657 aa5.49□□□□□ -1.53
HMGB3P19-201ENST00000403971 ACEP12821 1306 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 NSD3Q9BZ95 1437 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 PIK3C2AO00443 1686 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 WIPF3A6NGB9 483 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 NPIPB13A6NJU9 1138 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 NPIPB4C9JG80 1138 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 CCER2I3L3R5 266 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 EYA2O00167 538 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ENO1P06733 434 aaKnown RBP5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 CNPP09543 421 aaKnown RBP5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 PRPH2P23942 346 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 SOX2P48431 317 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 MCM2P49736 904 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 MTA1Q13330 715 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 DLGAP5Q15398 846 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ANXA2RQ3ZCQ2 193 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 CTXN3Q4LDR2 81 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ALFQ53S48 1182 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 TMEM88Q6PEY1 159 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 TMTC1Q8IUR5 882 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 OSR1Q8TAX0 266 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF398Q8TD17 642 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 MAP4K1Q92918 833 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 USP13Q92995 863 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ATP2A3Q93084 1043 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZG16BQ96DA0 208 aa5.48□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF347Q96SE7 839 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms