RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FZD9O00144 591 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 TRIM13O60858 407 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 RTN3O95197 1032 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.45
RBM39-206ENST00000403542 TSPAN8P19075 237 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 DPP6P42658 865 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 HARS2P49590 506 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 SERPINB8P50452 374 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 MTTPP55157 894 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 LAMB3Q13751 1172 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 PDK1Q15118 436 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SLC25A52Q3SY17 297 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 ACMSDQ8TDX5 336 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 APBB2Q92870 758 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 PRPF18Q99633 342 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 CPNE1Q99829 537 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SIK2Q9H0K1 926 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MT-CYBP00156 380 aaPredicted RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 SOX11P35716 441 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MPP1Q00013 466 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 FSCBQ5H9T9 825 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 AAGABQ6PD74 315 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 KBTBD6Q86V97 674 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 OSTM1Q86WC4 334 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 APPL2Q8NEU8 664 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 EPAS1Q99814 870 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ILKAPQ9H0C8 392 aaPredicted RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 LRRC40Q9H9A6 602 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ADA2Q9NZK5 511 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 TLK1Q9UKI8 766 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 TLL2Q9Y6L7 1015 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 YJEFN3A6XGL0 299 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 NCAM1P13591 858 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 TFEBP19484 476 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 TKTL1P51854 596 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 CHN2P52757 468 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 LIMK2P53671 638 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 TPI1P60174 286 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 CEACAM7Q14002 265 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 CYTH1Q15438 398 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ZNF484Q5JVG2 852 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 SEL1L3Q68CR1 1132 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 RWDD4Q6NW29 188 aaKnown RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 RBM44Q6ZP01 1051 aaKnown RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 LILRA2Q8N149 483 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 PQLC1Q8N2U9 271 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 RNF217Q8TC41 542 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MPP4Q96JB8 637 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 DDIT4Q9NX09 232 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 SORCS3Q9UPU3 1222 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MLNP12872 115 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 CD68P34810 354 aaPredicted RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 GRM5P41594 1212 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 SLC26A2P50443 739 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 POU5F1BQ06416 359 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 RALGDSQ12967 914 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ART3Q13508 389 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 GPRIN1Q7Z2K8 1008 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 KYQ8NBH2 561 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 NAT14Q8WUY8 206 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 FERMT1Q9BQL6 677 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 MLPHQ9BV36 600 aaPredicted RBP12.2□□□□□ -0.46
RBM39-206ENST00000403542 FAM192AQ9GZU8 254 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 GTSE1Q9NYZ3 720 aa12.2□□□□□ -0.46
RBM39-206ENST00000403542 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 VAPBO95292 243 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 CYLC2Q14093 348 aaPredicted RBP12.19□□□□□ -0.46
RBM39-206ENST00000403542 FAM187BQ17R55 369 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 SLC5A9Q2M3M2 681 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 WSCD1Q658N2 575 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 C4orf22Q6V702 233 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 CYP2R1Q6VVX0 501 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 PSTKQ8IV42 348 aaKnown RBP12.19□□□□□ -0.46
RBM39-206ENST00000403542 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 RNF34Q969K3 372 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 SNX27Q96L92 541 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 PKP2Q99959 881 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 C16orf70Q9BSU1 422 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 ULBP1Q9BZM6 244 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 SHROOM3Q8TF72 1996 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 DFFAO00273 331 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 DNAJA2O60884 412 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 HUS1O60921 280 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 RPL10P27635 214 aaKnown RBP12.19□□□□□ -0.46
RBM39-206ENST00000403542 RPS6KA3P51812 740 aa12.19□□□□□ -0.46
RBM39-206ENST00000403542 AFF1P51825 1210 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms