RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KRT35Q92764 455 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 HMCESQ96FZ2 354 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 DDX56Q9NY93 547 aaKnown RBP17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 RCOR3Q9P2K3 495 aaPredicted RBP17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 SLC25A13Q9UJS0 675 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 FBXO4Q9UKT5 387 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 ACTL7AQ9Y615 435 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 MIA3Q5JRA6 1907 aa17.59■□□□□ 0.41
PTCHD3P3-201ENST00000403073 TCRBV21S2A2A0A5A6 115 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 C3orf70A6NLC5 250 aaPredicted RBP17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 H0Y858 1186 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 K7ERQ8 282 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PSTPIP1O43586 416 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 KDELR3O43731 214 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SP9P0CG40 484 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 TDGF1P13385 188 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ETFBP38117 255 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 MARCKSL1P49006 195 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 NDST2P52849 883 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ARF5P84085 180 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 AFMIDQ63HM1 303 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HEATR6Q6AI08 1181 aaKnown RBP17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 LEKR1Q6ZMV7 388 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 TP53INP2Q8IXH6 220 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 RNF10Q8N5U6 811 aaKnown RBP17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ZNF670Q9BS34 389 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CD248Q9HCU0 757 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 POLMQ9NP87 494 aaPredicted RBP17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 DONSONQ9NYP3 566 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CAPN6Q9Y6Q1 641 aa17.58■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SYNCRIPO60506 623 aaKnown RBP17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 APBB3O95704 486 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CD160O95971 181 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 VAV1P15498 845 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 NNMTP40261 264 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PAPOLAP51003 745 aaKnown RBP17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 TCF15Q12870 199 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SERINC3Q13530 473 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 STARD3Q14849 445 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PARP15Q460N3 678 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ACCSLQ4AC99 568 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ODF2Q5BJF6 829 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ANO7Q6IWH7 933 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 RETSATQ6NUM9 610 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ZNF662Q6ZS27 426 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 NT5DC3Q86UY8 548 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CAMKK1Q8N5S9 505 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PQLC3Q8N755 202 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ATP11CQ8NB49 1132 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 KDM1BQ8NB78 822 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 FAF2Q96CS3 445 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 RNF157Q96PX1 679 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PRRX2Q99811 253 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PRSS16Q9NQE7 514 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SUN2Q9UH99 717 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HPCAL4Q9UM19 191 aa17.57■□□□□ 0.4
PTCHD3P3-201ENST00000403073 KMT2EQ8IZD2 1858 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 DFFAO00273 331 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SMAD6O43541 496 aaKnown RBP17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 FTCDO95954 541 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SRCP12931 536 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 FNTBP49356 437 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 LLGL1Q15334 1064 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 DLG2Q15700 870 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HNRNPA1L2Q32P51 320 aaKnown RBP17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 MFSD7Q6UXD7 560 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PEX26Q7Z412 305 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 KATNAL2Q8IYT4 538 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 RCOR2Q8IZ40 523 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SYCE1Q8N0S2 351 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SH2D3CQ8N5H7 860 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 LZTR1Q8N653 840 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 FRS2Q8WU20 508 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HMGB4Q8WW32 186 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SLC6A17Q9H1V8 727 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 RAPGEFL1Q9UHV5 662 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 AMFRQ9UKV5 643 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HS3ST2Q9Y278 367 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PCDHA3Q9Y5H8 950 aa17.56■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ARHGAP42A6NI28 874 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 J3KR12 359 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ATP9BO43861 1147 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SIN3BO75182 1162 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ALDH1A2O94788 518 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ZRANB2O95218 330 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 GABRG2P18507 467 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CTNNA2P26232 953 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 HOXA6P31267 233 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 PEX5P50542 639 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 VASPP50552 380 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 CAMK2GQ13555 558 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 ZNF528Q3MIS6 628 aa17.55■□□□□ 0.4
PTCHD3P3-201ENST00000403073 C9orf64Q5T6V5 341 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms