RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 HABP4Q5JVS0 413 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 EPGNQ6UW88 154 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ZNF354CQ86Y25 554 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ARNTL2Q8WYA1 636 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 KLHL32Q96NJ5 620 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 CHCHD3Q9NX63 227 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 CACNG4Q9UBN1 327 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 CENPFP49454 3210 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 RNF103-CHMP3A0A140T963 221 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 SOWAHBA6NEL2 793 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ZNF839A8K0R7 811 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 IL18RAPO95256 599 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 VAPBO95292 243 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 SMIM18P0DKX4 95 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ZFXP17010 805 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 EPHX2P34913 555 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 TARBP2Q15633 366 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 METTL7BQ6UX53 244 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 CLVS1Q8IUQ0 354 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 IPMKQ8NFU5 416 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 VPS39Q96JC1 886 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 PRICKLE1Q96MT3 831 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 LRRC4Q9HBW1 653 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.34□□□□□ -0.91
HPS4-203ENST00000402105 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 GREB1LQ9C091 1923 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 HDAC3O15379 428 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 MT-ND1P03886 318 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 SNAPC2Q13487 334 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 ITGA7Q13683 1181 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 ADGRE1Q14246 886 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 MYBPC3Q14896 1274 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 PCSK7Q16549 785 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 FAM91A1Q658Y4 838 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 DENND6AQ8IWF6 608 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 RNF139Q8WU17 664 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 EDEM1Q92611 657 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 FAM96AQ9H5X1 160 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 DOCK5Q9H7D0 1870 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 LRRC40Q9H9A6 602 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 C6orf203Q9P0P8 240 aaPredicted RBP9.34□□□□□ -0.91
HPS4-203ENST00000402105 XPR1Q9UBH6 696 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 EGFL7Q9UHF1 273 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 FOCADQ5VW36 1801 aa9.34□□□□□ -0.91
HPS4-203ENST00000402105 DFFAO00273 331 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 ENDOD1O94919 500 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 IL1BP01584 269 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 UGT1A6P19224 532 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 TPSB2P20231 275 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 NMBRP28336 390 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 ARL1P40616 181 aaPredicted RBP9.33□□□□□ -0.92
HPS4-203ENST00000402105 DPP6P42658 865 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 PSMD7P51665 324 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 MBTD1Q05BQ5 628 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 SEMA5AQ13591 1074 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 CSHL1Q14406 222 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 TPSAB1Q15661 275 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 KIF19Q2TAC6 998 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 CATSPERGQ6ZRH7 1159 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 CYGBQ8WWM9 190 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 ELMO2Q96JJ3 720 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 QKIQ96PU8 341 aaKnown RBP eCLIP9.33□□□□□ -0.92
HPS4-203ENST00000402105 HAPLN3Q96S86 360 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 CPNE1Q99829 537 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 ARHGEF38Q9NXL2 777 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 BCAP29Q9UHQ4 241 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 AP4S1Q9Y587 144 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 PDLIM1O00151 329 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 STRNO43815 780 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 TPP2P29144 1249 aaPredicted RBP9.33□□□□□ -0.92
HPS4-203ENST00000402105 HPCAP84074 193 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 MPP1Q00013 466 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 CCDC153Q494R4 210 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 GRTP1Q5TC63 336 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 ZBTB49Q6ZSB9 765 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 SIX6OS1Q8N1H7 587 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 AGBL3Q8NEM8 1001 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 FLAD1Q8NFF5 587 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 OR9I1Q8NGQ6 314 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 NXNL1Q96CM4 212 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 RBBP8Q99708 897 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 SFMBT1Q9UHJ3 866 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 TIMM13Q9Y5L4 95 aaPredicted RBP9.33□□□□□ -0.92
HPS4-203ENST00000402105 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 GIPC1O14908 333 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 PMPCBO75439 489 aa9.33□□□□□ -0.92
HPS4-203ENST00000402105 FBXO21O94952 628 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms