RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 J3KR12 359 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 RAMP2O60895 175 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 PIAS1O75925 651 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 HLA-DQB2P05538 268 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 OR1E1P30953 314 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 CYP4F8P98187 520 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 RASA2Q15283 850 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 UNC5AQ6ZN44 842 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 ARL14EPQ8N8R7 260 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-205ENST00000401607 CAPS2Q9BXY5 557 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 GLOD4Q9HC38 313 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 RBM22Q9NW64 420 aaKnown RBP eCLIP26.16■■□□□ 1.789e-7■■□□□ 12.8
CPNE1-205ENST00000401607 MAD1L1Q9Y6D9 718 aa26.16■■□□□ 1.78
CPNE1-205ENST00000401607 USP12O75317 370 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 MGAT1P26572 445 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 ATP5DP30049 168 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 CLCN4P51793 760 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 SESN2P58004 480 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 UBE3AQ05086 875 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 POLD3Q15054 466 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 TMED2Q15363 201 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 ANO4Q32M45 955 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 PARP15Q460N3 678 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 OR52K1Q8NGK4 314 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 ADAMTS19Q8TE59 1207 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 SLC22A17Q8WUG5 538 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 ARNTL2Q8WYA1 636 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 FCRL5Q96RD9 977 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 SDR42E2A6NKP2 422 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 H3BNC9 293 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 NRG2O14511 850 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 TRDMT1O14717 391 aaKnown RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 GSTA2P09210 222 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 SGSHP51688 502 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 YBEYP58557 167 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 RPS24P62847 133 aaKnown RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 ZXDBP98169 803 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 PPARDQ03181 441 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 CAMK1Q14012 370 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 PRPSAP1Q14558 356 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 TTC19Q6DKK2 380 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 PRPF39Q86UA1 669 aaKnown RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 MRRFQ96E11 262 aaKnown RBP26.15■■□□□ 1.78
CPNE1-205ENST00000401607 STAMBPL1Q96FJ0 436 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 CYTH2Q99418 400 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 CASS4Q9NQ75 786 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 UBP1Q9NZI7 540 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 STOML2Q9UJZ1 356 aa26.15■■□□□ 1.78
CPNE1-205ENST00000401607 GRXCR1A8MXD5 290 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 GREM1O60565 184 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 STX2P32856 288 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 IRS1P35568 1242 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 ACVRL1P37023 503 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 IFNAR2P48551 515 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 CDH4P55283 916 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 CRADDP78560 199 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 SMAD3P84022 425 aaKnown RBP26.14■■□□□ 1.78
CPNE1-205ENST00000401607 GUCY1A3Q02108 690 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 HNRNPDQ14103 355 aaKnown RBP26.14■■□□□ 1.78
CPNE1-205ENST00000401607 KBTBD12Q3ZCT8 623 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 RABGAP1LQ5R372 815 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 C9orf50Q5SZB4 431 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 ADGRF1Q5T601 910 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 FAM109BQ6ICB4 259 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-205ENST00000401607 SPATA22Q8NHS9 363 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 PAFAH2Q99487 392 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 RETREG1Q9H6L5 497 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 SP110Q9HB58 689 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 PSMC3IPQ9P2W1 217 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-205ENST00000401607 PCDHA11Q9Y5I1 949 aa26.14■■□□□ 1.78
CPNE1-205ENST00000401607 DENND4CQ5VZ89 1909 aa26.14■■□□□ 1.77
CPNE1-205ENST00000401607 GRM6O15303 877 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 CREB1P16220 341 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 HDCP19113 662 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 MDH1P40925 334 aaKnown RBP26.13■■□□□ 1.77
CPNE1-205ENST00000401607 SERINC3Q13530 473 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 TAOK1Q7L7X3 1001 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.13■■□□□ 1.77
CPNE1-205ENST00000401607 MRPS31Q92665 395 aaKnown RBP26.13■■□□□ 1.77
CPNE1-205ENST00000401607 LRRC40Q9H9A6 602 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 SYBUQ9NX95 663 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 CPQQ9Y646 472 aa26.13■■□□□ 1.77
CPNE1-205ENST00000401607 CCL16O15467 120 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 GNGT1P63211 74 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 IL10RBQ08334 325 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 STEAP4Q687X5 459 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 ADGRD1Q6QNK2 874 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 ELMOD1Q8N336 334 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 OR52K2Q8NGK3 314 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 GSDMBQ8TAX9 411 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 LATS1O95835 1130 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 MT-CYBP00156 380 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-205ENST00000401607 PRKCHP24723 683 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 SLC10A7Q0GE19 358 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 PPM1LQ5SGD2 360 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 DCAKDQ8WVC6 231 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 SELENOSQ9BQE4 189 aa26.12■■□□□ 1.77
CPNE1-205ENST00000401607 CNOT10Q9H9A5 744 aaKnown RBP26.12■■□□□ 1.77
CPNE1-205ENST00000401607 AAR2Q9Y312 384 aaKnown RBP26.12■■□□□ 1.77
CPNE1-205ENST00000401607 MTCL1Q9Y4B5 1905 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms