RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 DDX39AO00148 427 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TPP1O14773 563 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 XPO1O14980 1071 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 DHX15O43143 795 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 PALMO75781 387 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 DNAJB5O75953 348 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 USP1O94782 785 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 LARGE1O95461 756 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 S100A9P06702 114 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 PRKAR1AP10644 381 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ACPPP15309 386 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 IFNAR1P17181 557 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 MX2P20592 715 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CD52P31358 61 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 BMPR1AP36894 532 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 HSPA9P38646 679 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 GSSP48637 474 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 IST1P53990 364 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 RPS26P62854 115 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 RNASELQ05823 741 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CDC20Q12834 499 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CDC16Q13042 620 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TBX2Q13207 712 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 PRKG2Q13237 762 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TRPC3Q13507 836 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ARID5BQ14865 1188 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 NCF4Q15080 339 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ANKRD20A8PQ5CZ79 823 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 KCNT1Q5JUK3 1230 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 VARS2Q5ST30 1063 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ATL3Q6DD88 541 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 LIN54Q6MZP7 749 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 B3GNT9Q6UX72 402 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 IDO2Q6ZQW0 420 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 SYDE1Q6ZW31 735 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TBC1D1Q86TI0 1168 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 LAPTM4BQ86VI4 370 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TMTC1Q8IUR5 882 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CCNJLQ8IV13 435 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CCDC60Q8IWA6 550 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CSGALNACT2Q8N6G5 542 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ZSCAN1Q8NBB4 408 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 SLC4A11Q8NBS3 891 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 AGR3Q8TD06 166 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 TRAPPC12Q8WVT3 735 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 SUSD3Q96L08 255 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 VPS35Q96QK1 796 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF577Q9BSK1 485 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF302Q9NR11 478 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 KLHL3Q9UH77 587 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 METRNQ9UJH8 293 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
CLIP4-202ENST00000401605 LRRC42Q9Y546 428 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 PCDHGB6Q9Y5F9 930 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 XIRP2A4UGR9 3374 aa6.29□□□□□ -1.4
CLIP4-202ENST00000401605 C16orf96A6NNT2 1141 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF891A8MT65 544 aaPredicted RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 A8MX80 341 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 SPOPO43791 374 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CNOT3O75175 753 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PABPC4LP0CB38 370 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 STAG3L1P0CL83 205 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 KCNA5P22460 613 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 KLRC1P26715 233 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CIITAP33076 1130 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CTNNB1P35222 781 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 KRT2P35908 639 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 RGS7P49802 495 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF75DP51815 510 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 SRP54P61011 504 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 COG7P83436 770 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF33BQ06732 778 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ASPHQ12797 758 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ACAP2Q15057 778 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 LLGL1Q15334 1064 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 NTRK3Q16288 839 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF423Q2M1K9 1284 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 ZNF484Q5JVG2 852 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 RBM20Q5T481 1227 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 FYB2Q5VWT5 728 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CCDC149Q6ZUS6 474 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 TICAM1Q8IUC6 712 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 DNAAF3Q8N9W5 541 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PHKBQ93100 1093 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 IQCDQ96DY2 449 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PPP1R10Q96QC0 940 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 C1QTNF1Q9BXJ1 281 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CELF4Q9BZC1 486 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 RC3H2Q9HBD1 1191 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 TUFT1Q9NNX1 390 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 EIF2B4Q9UI10 523 aaKnown RBP6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PADI3Q9ULW8 664 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 CACNG2Q9Y698 323 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 COL1A2P08123 1366 aa6.28□□□□□ -1.4
CLIP4-202ENST00000401605 TANC1Q9C0D5 1861 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms