RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SLIT3O75094 1523 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 CSPG5O95196 566 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PRDX5P30044 214 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 STT3AP46977 705 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 C1DQ13901 141 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 DOK7Q18PE1 504 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 KCNK18Q7Z418 384 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF276Q8N554 614 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PSPC1Q8WXF1 523 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PHF12Q96QT6 1004 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 PDCD10Q9BUL8 212 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 KATNAL1Q9BW62 490 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 NOL11Q9H8H0 719 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 TBC1D13Q9NVG8 400 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MAP3K20Q9NYL2 800 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 INPP4BO15327 924 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 AQP9O43315 295 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 BCAS2O75934 225 aaPredicted RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 OR7A10O76100 309 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 M6PRP20645 277 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 ATP6V1B2P21281 511 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 RPL22P35268 128 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 AKR1D1P51857 326 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MAPK12P53778 367 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MTX3Q5HYI7 312 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MZT2AQ6P582 158 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 STK32CQ86UX6 486 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF34Q8IZ26 560 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MIER2Q8N344 545 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MPP5Q8N3R9 675 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 RNF34Q969K3 372 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 CCDC106Q9BWC9 280 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 MRPL9Q9BYD2 267 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 NUDT5Q9UKK9 219 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 ETS1P14921 441 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 ERP29P30040 261 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 NPTX2P47972 431 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 GNA12Q03113 381 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 CCDC85BQ15834 202 aaPredicted RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 SNRNP35Q16560 246 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 INTS11Q5TA45 600 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 BPIFB6Q8NFQ5 453 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 JPH3Q8WXH2 748 aaPredicted RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 SLITRK1Q96PX8 696 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 POP1Q99575 1024 aaKnown RBP10.13□□□□□ -0.79
PTPRM-203ENST00000400060 COA1Q9GZY4 146 aa10.13□□□□□ -0.79
PTPRM-203ENST00000400060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.13□□□□□ -0.794e-7■□□□□ 8.5
PTPRM-203ENST00000400060 E7ENX8 843 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 APOC4-APOC2K7ER74 178 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 APOC2P02655 101 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 ATF6P18850 670 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 GRIA2P42262 883 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
PTPRM-203ENST00000400060 GCNT1Q02742 428 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 DPYSL3Q14195 570 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 RFTN1Q14699 578 aaPredicted RBP10.12□□□□□ -0.79
PTPRM-203ENST00000400060 NFE2Q16621 373 aaPredicted RBP10.12□□□□□ -0.79
PTPRM-203ENST00000400060 ISLR2Q6UXK2 745 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 CYP2R1Q6VVX0 501 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.12□□□□□ -0.79
PTPRM-203ENST00000400060 SVOPLQ8N434 492 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 MRC1P22897 1456 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 VILLO15195 856 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 DFNA5O60443 496 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 CREB1P16220 341 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 GARTP22102 1010 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 PKLRP30613 574 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 CRKP46108 304 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 BMPR2Q13873 1038 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 PRKG1Q13976 671 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 KIAA0408Q6ZU52 694 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 BTN2A1Q7KYR7 527 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 LINC00523Q86TU6 105 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 IFNEQ86WN2 208 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 NIM1KQ8IY84 436 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 KCTD4Q8WVF5 259 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 FAR1Q8WVX9 515 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TRIM8Q9BZR9 551 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 SLC22A4Q9H015 551 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 FAM49BQ9NUQ9 324 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 PI4KBQ9UBF8 816 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 EML1O00423 815 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 NR5A2O00482 541 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 ABCB7O75027 752 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TULP3O75386 442 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 RFPL2O75678 378 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 APOL3O95236 402 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 CD40LGP29965 261 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TALDO1P37837 337 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TSNQ15631 228 aaKnown RBP10.12□□□□□ -0.79
PTPRM-203ENST00000400060 PGS1Q32NB8 556 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 OGFOD2Q6N063 350 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 KCTD1Q719H9 257 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 POLNQ7Z5Q5 900 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 C4orf32Q8N8J7 132 aa10.12□□□□□ -0.79
PTPRM-203ENST00000400060 TRMT13Q9NUP7 481 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms