RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ATP13A4Q4VNC1 1196 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 TMCO3Q6UWJ1 677 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 RASSF3Q86WH2 238 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 KATNAL2Q8IYT4 538 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 CCDC33Q8N5R6 958 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 OR7D4Q8NG98 312 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 CYB5D2Q8WUJ1 264 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 SORCS1Q8WY21 1168 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 ACOX2Q99424 681 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 KLC2Q9H0B6 622 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 CACNA2D2Q9NY47 1150 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 HCN4Q9Y3Q4 1203 aa18.08■□□□□ 0.48
CTNS-203ENST00000399306 GRID2IPA4D2P6 1211 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 ANTXRLA6NF34 631 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 ARHGAP42A6NI28 874 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 MIF4GDA9UHW6 222 aaKnown RBP18.07■□□□□ 0.48
CTNS-203ENST00000399306 ZBTB24O43167 697 aaPredicted RBP18.07■□□□□ 0.48
CTNS-203ENST00000399306 SYNCRIPO60506 623 aaKnown RBP18.07■□□□□ 0.48
CTNS-203ENST00000399306 CTNNA2P26232 953 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
CTNS-203ENST00000399306 PTPN5P54829 565 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 SERINC3Q13530 473 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 TAZQ16635 292 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 TMEM92Q6UXU6 159 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 PLPP6Q8IY26 295 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 SH2D3CQ8N5H7 860 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 TSTD1Q8NFU3 115 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 ISG20Q96AZ6 181 aaKnown RBP18.07■□□□□ 0.48
CTNS-203ENST00000399306 CEP44Q9C0F1 390 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 C2orf42Q9NWW7 574 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 PCDHA3Q9Y5H8 950 aa18.07■□□□□ 0.48
CTNS-203ENST00000399306 EDDM13A0A1B0GTR0 161 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 C3orf70A6NLC5 250 aaPredicted RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 RASA4BC9J798 803 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 RASA4O43374 803 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 SP9P0CG40 484 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 ZFXP17010 805 aaPredicted RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 CNR2P34972 360 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 CTSOP43234 321 aaPredicted RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 COPS2P61201 443 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 CSTF1Q05048 431 aaKnown RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 PAFAH1B3Q15102 231 aaKnown RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 INO80DQ53TQ3 878 aaPredicted RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 TMCO4Q5TGY1 634 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 NT5DC3Q86UY8 548 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 WDR5BQ86VZ2 330 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 ARHGAP12Q8IWW6 846 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 RCOR2Q8IZ40 523 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 EXD1Q8NHP7 514 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 PCDH19Q8TAB3 1148 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 FRS2Q8WU20 508 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 RAPGEF5Q92565 580 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 RBM41Q96IZ5 413 aaKnown RBP18.06■□□□□ 0.48
CTNS-203ENST00000399306 RNF157Q96PX1 679 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 SPON2Q9BUD6 331 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 CALN1Q9BXU9 219 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 ZSCAN32Q9NX65 697 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 EFR3BQ9Y2G0 817 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 PPP2R2CQ9Y2T4 447 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 PCDHGA2Q9Y5H1 932 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 RAD54BQ9Y620 910 aa18.06■□□□□ 0.48
CTNS-203ENST00000399306 MACROD2A1Z1Q3 448 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 LRRD1A4D1F6 860 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 WASH3PC4AMC7 463 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 CBX4O00257 560 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ZRANB2O95218 330 aaKnown RBP eCLIP18.05■□□□□ 0.48
CTNS-203ENST00000399306 EPHX1P07099 455 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 CD48P09326 243 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 SRCP12931 536 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 AMPD1P23109 780 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 PRKCHP24723 683 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 GJC1P36383 396 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ACVRL1P37023 503 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 SERPINH1P50454 418 aaKnown RBP18.05■□□□□ 0.48
CTNS-203ENST00000399306 ARF5P84085 180 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ZBTB16Q05516 673 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ZFYVE27Q5T4F4 411 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 LONP2Q86WA8 852 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ZBTB44Q8NCP5 570 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 PRSS33Q8NF86 280 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 OR2T3Q8NH03 318 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 SLCO3A1Q9UIG8 710 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 AMFRQ9UKV5 643 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 PLXND1Q9Y4D7 1925 aa18.05■□□□□ 0.48
CTNS-203ENST00000399306 ALOX15BO15296 676 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 ZSCAN12O43309 604 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 SNAP91O60641 907 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 PALMO75781 387 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 KRT1P04264 644 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 COL9A1P20849 921 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 TCF15Q12870 199 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 BYSLQ13895 437 aaKnown RBP18.04■□□□□ 0.48
CTNS-203ENST00000399306 RFTN1Q14699 578 aaPredicted RBP18.04■□□□□ 0.48
CTNS-203ENST00000399306 PPP2R5EQ16537 467 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 SLC9A4Q6AI14 798 aa18.04■□□□□ 0.48
CTNS-203ENST00000399306 ZC3H14Q6PJT7 736 aaKnown RBP18.04■□□□□ 0.48
CTNS-203ENST00000399306 PEX26Q7Z412 305 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms