RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF189O75820 626 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 CYP2B6P20813 491 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 ACAT1P24752 427 aaKnown RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 MTTPP55157 894 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 SEMA3BQ13214 749 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 CERCAMQ5T4B2 595 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 CLEC20AQ6ZU45 233 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 HIPK4Q8NE63 616 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 SLC7A14Q8TBB6 771 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 RTKNQ9BST9 563 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 MLPHQ9BV36 600 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 FLRT1Q9NZU1 646 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 RAD54BQ9Y620 910 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 I6L893 689 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 LTFP02788 710 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 FYNP06241 537 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 GLDCP23378 1020 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 PEX2P28328 305 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 CD68P34810 354 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 NUMBP49757 651 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 LILRA4P59901 499 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 CDC42EP1Q00587 391 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 MSLNQ13421 630 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 PCBP1Q15365 356 aaKnown RBP eCLIP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 XKR4Q5GH76 650 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 SAPCD2Q86UD0 394 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 KCNMB4Q86W47 210 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 NPWQ8N729 165 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 ACVR1CQ8NER5 493 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 ADAM32Q8TC27 787 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 GDPD5Q8WTR4 605 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 SREK1Q8WXA9 508 aaKnown RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 OR52B2Q96RD2 323 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 SLC9A7Q96T83 725 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 SH3GL3Q99963 347 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 MCMBPQ9BTE3 642 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 CCDC28BQ9BUN5 200 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 GBA3Q9H227 469 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 PIN4Q9Y237 131 aaKnown RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 DYNC1LI2O43237 492 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 TIMM44O43615 452 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 ATP9BO43861 1147 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 H2AFYO75367 372 aaKnown RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 AMHP03971 560 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 YY1P25490 414 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 TKTL1P51854 596 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 TPI1P60174 286 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 MPP3Q13368 585 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 TOP6BLQ8N6T0 577 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 AGR3Q8TD06 166 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 NTAN1Q96AB6 310 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 GATA5Q9BWX5 397 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 WDR6Q9NNW5 1121 aaKnown RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 TCF7L2Q9NQB0 619 aa26.07■■□□□ 1.76
COL13A1-203ENST00000398969 MAGED2Q9UNF1 606 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-203ENST00000398969 ERI2A8K979 691 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 NRP1O14786 923 aa26.06■■□□□ 1.76
COL13A1-203ENST00000398969 RAG1P15918 1043 aa26.06■■□□□ 1.76
COL13A1-203ENST00000398969 PTPN1P18031 435 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 AIF1P55008 147 aa26.06■■□□□ 1.76
COL13A1-203ENST00000398969 CSE1LP55060 971 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 XIAPP98170 497 aa26.06■■□□□ 1.76
COL13A1-203ENST00000398969 ROR2Q01974 943 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 CWF19L1Q69YN2 538 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 C20orf96Q9NUD7 363 aaPredicted RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 OXSMQ9NWU1 459 aa26.06■■□□□ 1.76
COL13A1-203ENST00000398969 CPSF2Q9P2I0 782 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 GNEQ9Y223 722 aaKnown RBP26.06■■□□□ 1.76
COL13A1-203ENST00000398969 NCAM2O15394 837 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 SERPINB6P35237 376 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 SCAPQ12770 1279 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 ZBTB17Q13105 803 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 RGMBQ6NW40 437 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 C17orf99Q6UX52 265 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 VPS39Q96JC1 886 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 LENG8Q96PV6 779 aaPredicted RBP26.05■■□□□ 1.76
COL13A1-203ENST00000398969 KCNK16Q96T55 309 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 CHRAC1Q9NRG0 131 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 SSX2IPQ9Y2D8 614 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 H3BNX3 289 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 CALRP27797 417 aaKnown RBP26.05■■□□□ 1.76
COL13A1-203ENST00000398969 AQP4P55087 323 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 IRF5Q13568 498 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 KBTBD6Q86V97 674 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 ZFAND2BQ8WV99 257 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 APOL2Q9BQE5 337 aa26.05■■□□□ 1.76
COL13A1-203ENST00000398969 IARS2Q9NSE4 1012 aaKnown RBP26.05■■□□□ 1.76
COL13A1-203ENST00000398969 UQCRBP14927 111 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 AXLP30530 894 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 MAP3K7CLP57077 242 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 SATB1Q01826 763 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 MFN1Q8IWA4 741 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 TMEM40Q8WWA1 233 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 ILKAPQ9H0C8 392 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-203ENST00000398969 MAGEB16A2A368 324 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 CHRNGP07510 517 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 ZNF865P0CJ78 1059 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-203ENST00000398969 NFKB1P19838 968 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 HCAR3P49019 387 aa26.04■■□□□ 1.76
COL13A1-203ENST00000398969 NPY2RP49146 381 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms