RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 AFF3P51826 1226 aaKnown RBP13.77□□□□□ -0.21
VCX3A-202ENST00000398729 KRT83P78385 493 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 ATP11AP98196 1134 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 TEAD4Q15561 434 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 TRIP6Q15654 476 aaKnown RBP13.77□□□□□ -0.21
VCX3A-202ENST00000398729 ALFQ53S48 1182 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 KIAA0895LQ68EN5 471 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 TRNP1Q6NT89 227 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 SETD3Q86TU7 594 aaPredicted RBP13.77□□□□□ -0.21
VCX3A-202ENST00000398729 FAM131BQ86XD5 332 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF683Q8IZ20 524 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 EMC1Q8N766 993 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 PNPLA1Q8N8W4 532 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 SLC30A5Q8TAD4 765 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 HAPLN3Q96S86 360 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 FAM129BQ96TA1 746 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 SERGEFQ9UGK8 458 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 OR51B4Q9Y5P0 310 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 SNX10Q9Y5X0 201 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.21
VCX3A-202ENST00000398729 ASH1LQ9NR48 2969 aaKnown RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 DRGXA6NNA5 263 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 E9PAM4 449 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 ATP9BO43861 1147 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 SRGAP2O75044 1071 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 CNTN5O94779 1100 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 UNGP13051 313 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 VAV1P15498 845 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 GOT1P17174 413 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 SDC4P31431 198 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 CSNK1EP49674 416 aaKnown RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 GALCP54803 685 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 HNRNPDQ14103 355 aaKnown RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 ZNF423Q2M1K9 1284 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 ANO6Q4KMQ2 910 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 C2orf49Q9BVC5 232 aaPredicted RBP13.76□□□□□ -0.21
VCX3A-202ENST00000398729 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 OSGEPQ9NPF4 335 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 MPP6Q9NZW5 540 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 KNTC1P50748 2209 aa13.76□□□□□ -0.21
VCX3A-202ENST00000398729 A0A1B0GVT2 93 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ENDOD1O94919 500 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 CALB1P05937 261 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 CCDC172P0C7W6 258 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 OR1E1P30953 314 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 GRIA4P48058 902 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 DLG2Q15700 870 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 CDO1Q16878 200 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 CLEC16AQ2KHT3 1053 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 COL28A1Q2UY09 1125 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ARL13BQ3SXY8 428 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 FAM46CQ5VWP2 391 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 NCEH1Q6PIU2 408 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
VCX3A-202ENST00000398729 TFAP2DQ7Z6R9 452 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ADAT2Q7Z6V5 191 aaKnown RBP13.75□□□□□ -0.21
VCX3A-202ENST00000398729 PHLDB2Q86SQ0 1253 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 PDZD3Q86UT5 571 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 OR2T34Q8NGX1 318 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 OR14C36Q8NHC7 312 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 RXFP2Q8WXD0 754 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ADAMTS14Q8WXS8 1223 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 BBC3Q96PG8 261 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-202ENST00000398729 PCDHB18PQ96TA0 734 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 GAREM1Q9H706 876 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 TM9SF3Q9HD45 589 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 SEPT11Q9NVA2 429 aaKnown RBP13.75□□□□□ -0.21
VCX3A-202ENST00000398729 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 HS3ST2Q9Y278 367 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-202ENST00000398729 SLCO1B1Q9Y6L6 691 aa13.75□□□□□ -0.21
VCX3A-202ENST00000398729 CFAP46Q8IYW2 2715 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 A0A1W2PPC4 97 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 C2CD4BA6NLJ0 364 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 MCF2LO15068 1137 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 ALOX15BO15296 676 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 SNAP91O60641 907 aa13.74□□□□□ -0.21
VCX3A-202ENST00000398729 CBFA2T3O75081 653 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms