RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 MUC3BQ9H195 1237 aa17.12■□□□□ 0.33
APTR-201ENST00000398043 PABPC3Q9H361 631 aaKnown RBP17.12■□□□□ 0.33
APTR-201ENST00000398043 EVLQ9UI08 416 aaPredicted RBP17.12■□□□□ 0.33
APTR-201ENST00000398043 SPTBN2O15020 2390 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 NDUFS2O75306 463 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 ACADMP11310 421 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 SRCP12931 536 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 PSMA2P25787 234 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 ACSL1P33121 698 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 HOXD12P35452 270 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 NNMTP40261 264 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 ID4P47928 161 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 MAPKAPK2P49137 400 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 LIMK1P53667 647 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 GNA12Q03113 381 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 DLG2Q15700 870 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 CST6Q15828 149 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 ASTE1Q2TB18 679 aaPredicted RBP17.11■□□□□ 0.33
APTR-201ENST00000398043 SCYL2Q6P3W7 929 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 USP30Q70CQ3 517 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 DNASE2BQ8WZ79 361 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 FAM131CQ96AQ9 280 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 HSPA12BQ96MM6 686 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 C2orf49Q9BVC5 232 aaPredicted RBP17.11■□□□□ 0.33
APTR-201ENST00000398043 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
APTR-201ENST00000398043 SERGEFQ9UGK8 458 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 SLC25A13Q9UJS0 675 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 SCML1Q9UN30 329 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 DNAH14Q0VDD8 3507 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 TRPM6Q9BX84 2022 aa17.11■□□□□ 0.33
APTR-201ENST00000398043 SHROOM3Q8TF72 1996 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 CXorf51AA0A1B0GTR3 108 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.1■□□□□ 0.33
APTR-201ENST00000398043 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 METTL12A8MUP2 240 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 K7ERQ8 282 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 ZNF821O75541 412 aaPredicted RBP17.1■□□□□ 0.33
APTR-201ENST00000398043 CD160O95971 181 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 DNTTP04053 509 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 DPP6P42658 865 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 KRT83P78385 493 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 IRX4P78413 519 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 ARF5P84085 180 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 TRIM14Q14142 442 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 ELAVL3Q14576 367 aaKnown RBP17.1■□□□□ 0.33
APTR-201ENST00000398043 EFHC2Q5JST6 749 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 SLC23A3Q6PIS1 610 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 MMAAQ8IVH4 418 aaKnown RBP17.1■□□□□ 0.33
APTR-201ENST00000398043 C1orf216Q8TAB5 229 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 NETO1Q8TDF5 533 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 FOXJ1Q92949 421 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.1■□□□□ 0.33
APTR-201ENST00000398043 THAP2Q9H0W7 228 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 PCED1AQ9H1Q7 454 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 SCINQ9Y6U3 715 aa17.1■□□□□ 0.33
APTR-201ENST00000398043 ATXN2Q99700 1313 aaKnown RBP17.1■□□□□ 0.33
APTR-201ENST00000398043 WASH4PA8MWX3 477 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 SLC30A4O14863 429 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 TM4SF5O14894 197 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 MID1O15344 667 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 LRCH4O75427 683 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 CYP1A2P05177 515 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 ACVRL1P37023 503 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 TBX2Q13207 712 aaPredicted RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 PUM1Q14671 1186 aaKnown RBP eCLIP17.09■□□□□ 0.33
APTR-201ENST00000398043 CA9Q16790 459 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 RWDD4Q6NW29 188 aaKnown RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 ALKBH5Q6P6C2 394 aaKnown RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 Q6ZVU0 165 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 FAM124AQ86V42 546 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 AADATQ8N5Z0 425 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 C12orf50Q8NA57 414 aaPredicted RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 OR8K1Q8NGG5 319 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 ARHGEF2Q92974 986 aaKnown RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 CAPN10Q9HC96 672 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
APTR-201ENST00000398043 MYO1AQ9UBC5 1043 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 DNAI1Q9UI46 699 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 SARDHQ9UL12 918 aa17.09■□□□□ 0.33
APTR-201ENST00000398043 CDX4O14627 284 aaPredicted RBP17.08■□□□□ 0.32
APTR-201ENST00000398043 KHNYNO15037 678 aaKnown RBP17.08■□□□□ 0.32
APTR-201ENST00000398043 MCF2LO15068 1137 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 ALOX15BO15296 676 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 RNASEH1O60930 286 aaKnown RBP17.08■□□□□ 0.32
APTR-201ENST00000398043 SDHBP21912 280 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 MIPP30301 263 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 SLC8A1P32418 973 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 DRD3P35462 400 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 EIF4A3P38919 411 aaKnown RBP17.08■□□□□ 0.32
APTR-201ENST00000398043 CLCN6P51797 869 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 METAP1P53582 386 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 ACAP1Q15027 740 aa17.08■□□□□ 0.32
APTR-201ENST00000398043 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms