RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 ZNF317Q96PQ6 595 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 BIRC5O15392 142 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 PEX1O43933 1283 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 USP1O94782 785 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 YWHAQP27348 245 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 GRIA4P48058 902 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 RETSATQ6NUM9 610 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TSHZ1Q6ZSZ6 1077 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 PARVBQ9HBI1 364 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 DDX18Q9NVP1 670 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 MGRN1O60291 552 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FSCN1Q16658 493 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TTC7BQ86TV6 843 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TDRPQ86YL5 185 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ADGRE3Q9BY15 652 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 DYRK4Q9NR20 520 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SCN3BQ9NY72 215 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 C2orf71A6NGG8 1288 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 PGM3O95394 542 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 AKR1A1P14550 325 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 NRF1Q16656 503 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SLC10A6Q3KNW5 377 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TREML2Q5T2D2 321 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 STK32CQ86UX6 486 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SNX31Q8N9S9 440 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 GLIS1Q8NBF1 620 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ACOX2Q99424 681 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SCHIP1Q9P0W5 487 aaPredicted RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ATXN2Q99700 1313 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 RPLP2P05387 115 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 COX4I1P13073 169 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ATP6V1B2P21281 511 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 GABRB2P47870 512 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FSTL1Q12841 308 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 PFKFB4Q16877 469 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SLC25A52Q3SY17 297 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ADCK2Q7Z695 626 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 RMND5BQ96G75 393 aaPredicted RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 CLIC5Q9NZA1 410 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 RAP2CQ9Y3L5 183 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 MSCO60682 206 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FNBP1LQ5T0N5 605 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 TRMT10BQ6PF06 316 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 CCDC81Q6ZN84 652 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
SOCS6-201ENST00000397942 EIF2AQ9BY44 585 aaKnown RBP12.63□□□□□ -0.39
SOCS6-201ENST00000397942 LDLRP01130 860 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PIRTP0C851 137 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 HNRNPLP14866 589 aaKnown RBP eCLIP12.62□□□□□ -0.392e-7■■□□□ 13.7
SOCS6-201ENST00000397942 PCYT1AP49585 367 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PPIDQ08752 370 aaKnown RBP12.62□□□□□ -0.39
SOCS6-201ENST00000397942 EML3Q32P44 896 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 MYO1HQ8N1T3 1032 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 CMASQ8NFW8 434 aaPredicted RBP12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PCDH19Q8TAB3 1148 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
SOCS6-201ENST00000397942 ELOVL6Q9H5J4 265 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PCDHB8Q9UN66 801 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 CYP51A1Q16850 503 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 SYTL3Q4VX76 610 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 CERCAMQ5T4B2 595 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 MLNP12872 115 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 TSPAN8P19075 237 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 PPIL2Q13356 520 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 POTEHQ6S545 545 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
SOCS6-201ENST00000397942 SLCO2A1Q92959 643 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 COG4Q9H9E3 785 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 ASCC3Q8N3C0 2202 aaKnown RBP12.62□□□□□ -0.39
SOCS6-201ENST00000397942 C2CD4BA6NLJ0 364 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 CFHP08603 1231 aa12.62□□□□□ -0.39
SOCS6-201ENST00000397942 WNT3AP56704 352 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms