RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CHSY1Q86X52 802 aa16.58■□□□□ 0.24
CUX2-202ENST00000397643 PRMT1Q99873 361 aaKnown RBP16.58■□□□□ 0.24
CUX2-202ENST00000397643 ANO10Q9NW15 660 aa16.58■□□□□ 0.24
CUX2-202ENST00000397643 DACH1Q9UI36 760 aa16.58■□□□□ 0.24
CUX2-202ENST00000397643 PPM1HQ9ULR3 514 aa16.58■□□□□ 0.24
CUX2-202ENST00000397643 U3KQA8 63 aa16.58■□□□□ 0.24
CUX2-202ENST00000397643 CAPN8A6NHC0 703 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PSMA7O14818 248 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 OPA1O60313 960 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 BMP6P22004 513 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PRCPP42785 496 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PMS1P54277 932 aaKnown RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 GABREP78334 506 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PITX1P78337 314 aaPredicted RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 DAB2P98082 770 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 SULT2A1Q06520 285 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 STILQ15468 1287 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 POM121L1PQ3SYA9 428 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 ZC3H12AQ5D1E8 599 aaKnown RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 PIP5KL1Q5T9C9 394 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 OR52K2Q8NGK3 314 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 SNRNP27Q8WVK2 155 aaKnown RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 OR8D1Q8WZ84 308 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 TTC9Q92623 222 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 ALG14Q96F25 216 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 BTN2A3PQ96KV6 586 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 ASCL3Q9NQ33 180 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 TJP2Q9UDY2 1190 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 SSUH2Q9Y2M2 353 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PCDHB4Q9Y5E5 795 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 PIEZO2Q9H5I5 2752 aa16.57■□□□□ 0.24
CUX2-202ENST00000397643 TDRD6O60522 2096 aaKnown RBP16.57■□□□□ 0.24
CUX2-202ENST00000397643 SYCE3A1L190 88 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 FFAR2O15552 330 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 ATP9BO43861 1147 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 LZTS3O60299 673 aaPredicted RBP16.56■□□□□ 0.24
CUX2-202ENST00000397643 PIAS2O75928 621 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 APOEP02649 317 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 THEGLP0DJG4 465 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 NNMTP40261 264 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 GPD2P43304 727 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 UCNP55089 124 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 STX1AQ16623 288 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 ARHGAP40Q5TG30 622 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 FAM46CQ5VWP2 391 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 FAM149B1Q96BN6 582 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
CUX2-202ENST00000397643 MYOCQ99972 504 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 PREBQ9HCU5 417 aa16.56■□□□□ 0.24
CUX2-202ENST00000397643 A0A1W2PNU3 283 aaPredicted RBP16.55■□□□□ 0.24
CUX2-202ENST00000397643 TCAF2A6NFQ2 919 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 PPP1R3GB7ZBB8 358 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 F5H5T6 163 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 MCF2LO15068 1137 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 ALOX15BO15296 676 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
CUX2-202ENST00000397643 USP12O75317 370 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 CSO75390 466 aaKnown RBP16.55■□□□□ 0.24
CUX2-202ENST00000397643 MYF5P13349 255 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 PRLRP16471 622 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 LSSP48449 732 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 FMO5P49326 533 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 IRAK1P51617 712 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 ERVPABLB-1P60509 514 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 TYRO3Q06418 890 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 LY6DQ14210 128 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 CT47A1Q5JQC4 288 aaPredicted RBP16.55■□□□□ 0.24
CUX2-202ENST00000397643 Q6ZVU0 165 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 DSG4Q86SJ6 1040 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 SLC22A18ASQ8N1D0 253 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 OR13H1Q8NG92 308 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 LMO3Q8TAP4 145 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 NOX5Q96PH1 765 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 DEPDC7Q96QD5 511 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 TSG101Q99816 390 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 POLR1BQ9H9Y6 1135 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 FZD3Q9NPG1 666 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 OR51B4Q9Y5P0 310 aa16.55■□□□□ 0.24
CUX2-202ENST00000397643 KCNU1A8MYU2 1149 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 PMM2O15305 246 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 SLC31A1O15431 190 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 RNGTTO60942 597 aaKnown RBP16.54■□□□□ 0.24
CUX2-202ENST00000397643 TRUB2O95900 331 aaKnown RBP16.54■□□□□ 0.24
CUX2-202ENST00000397643 GP1BAP07359 652 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 CTSLP07711 333 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
CUX2-202ENST00000397643 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
CUX2-202ENST00000397643 CENPCQ03188 943 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 DLG2Q15700 870 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 ZNF284Q2VY69 593 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 DPCR1Q3MIW9 517 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 BROXQ5VW32 411 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms