RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HEMGNQ9BXL5 484 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SMARCAL1Q9NZC9 954 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 HMGXB4Q9UGU5 601 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 PCDHA11Q9Y5I1 949 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 MYBPHLA2RUH7 354 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CCNB1P14635 433 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MLH1P40692 756 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 OTUD1Q5VV17 481 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 GDF6Q6KF10 455 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CLEC14AQ86T13 490 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CCDC33Q8N5R6 958 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ISG20Q96AZ6 181 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 KIF9Q9HAQ2 790 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 RRAGCQ9HB90 399 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 TELO2Q9Y4R8 837 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM110-MUSTN1A8MSY1 372 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PLIN3O60664 434 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 NEBLO76041 1014 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 HAPLN1P10915 354 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 NCAM1P13591 858 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 RBL1P28749 1068 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 WDR4P57081 412 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 IRAK1BP1Q5VVH5 260 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ATPAF2Q8N5M1 289 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 HCAR2Q8TDS4 363 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 C2orf49Q9BVC5 232 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PLEKHA4Q9H4M7 779 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 SLC9A3R1O14745 358 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 SOD2P04179 222 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PRKCZQ05513 592 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CCDC25Q86WR0 208 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 FAM71DQ8N9W8 422 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 BEGAINQ9BUH8 593 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PCSK1NQ9UHG2 260 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 HSPA1AP0DMV8 641 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 HSPA1BP0DMV9 641 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 C7P10643 843 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 EPHA5P54756 1037 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 YWHAGP61981 247 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MARC1Q5VT66 337 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MRNIPQ6NTE8 343 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PHOSPHO2Q8TCD6 241 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MRPL46Q9H2W6 279 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 MARCH2Q9P0N8 246 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 RPS6KL1Q9Y6S9 549 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CLGNO14967 610 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ATP5C1P36542 298 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 DNAJB13P59910 316 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PRKAA1Q13131 559 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 FAM131BQ86XD5 332 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 SLC22A9Q8IVM8 553 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 RIN2Q8WYP3 895 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 RNF39Q9H2S5 420 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 SYTL2Q9HCH5 934 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 VPS28Q9UK41 221 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 LTBP2Q14767 1821 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 DDHD2O94830 711 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PAPOLAP51003 745 aaKnown RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 XIAPP98170 497 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 DSG1Q02413 1049 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 PLOD1Q02809 727 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ACTN3Q08043 901 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CRYMQ14894 314 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CYP4F22Q6NT55 531 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 FUT10Q6P4F1 479 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ZNF534Q76KX8 674 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 DCAKDQ8WVC6 231 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-206ENST00000397617 CNDP1Q96KN2 507 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ZFP42Q96MM3 310 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 NCKIPSDQ9NZQ3 722 aa5.98□□□□□ -1.45
PTPRD-206ENST00000397617 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 HNRNPA1P09651 372 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PTPN3P26045 913 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 HARS2P49590 506 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 RNASE9P60153 205 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TRMT5Q32P41 509 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ANKRD20A4Q4UJ75 823 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PAWRQ96IZ0 340 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 POLR1EQ9GZS1 481 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 UTP6Q9NYH9 597 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TRPM5Q9NZQ8 1165 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 VANGL2Q9ULK5 521 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SCAF8Q9UPN6 1271 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 RAMP2O60895 175 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 RASSF9O75901 435 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CD52P31358 61 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 HPDP32754 393 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ATP11AP98196 1134 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ADGRF1Q5T601 910 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PKN3Q6P5Z2 889 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 NDUFAF2Q8N183 169 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 C12orf29Q8N999 325 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 FAM126AQ9BYI3 521 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SPATS2LQ9NUQ6 558 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 INTS10Q9NVR2 710 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms