RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 WBP11Q9Y2W2 641 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 AP3D1O14617 1153 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TPP1O14773 563 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 RAMP2O60895 175 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 IL12AP29459 219 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 NPTX2P47972 431 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TKTL1P51854 596 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CYP4F2P78329 520 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CYP4F3Q08477 520 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 MTAPQ13126 283 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 GIT2Q14161 759 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TTC23Q5W5X9 447 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZHX1-C8orf76Q96EF9 292 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 SEMA6BQ9H3T3 888 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ACADLP28330 430 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 AKR1D1P51857 326 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 COPZ1P61923 177 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 PTPN11Q06124 597 aaPredicted RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 PAGE2BQ5JRK9 111 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZCCHC23Q6ZST2 131 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 GPRC5CQ9NQ84 441 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 DKK3Q9UBP4 350 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZBTB14O43829 449 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CAPGP40121 348 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 POLD2P49005 469 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 PLK1P53350 603 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 SQLEQ14534 574 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ALG11Q2TAA5 492 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CCDC157Q569K6 752 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 SLC45A4Q5BKX6 768 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TBC1D16Q8TBP0 767 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 HAVCR1Q96D42 359 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 VCPIP1Q96JH7 1222 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TNPO3Q9Y5L0 923 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 PECAM1P16284 738 aaPredicted RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ITGA2P17301 1181 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TTC7BQ86TV6 843 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 MRPS7Q9Y2R9 242 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZW10O43264 779 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SGTAO43765 313 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 OFCC1Q8IZS5 231 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 STK40Q8N2I9 435 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 LPCAT1Q8NF37 534 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 GDF3Q9NR23 364 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 BARX2Q9UMQ3 279 aaPredicted RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 R3HDM2Q9Y2K5 976 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 A0A087WZ62 844 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 RAB25P57735 213 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ADIGQ0VDE8 80 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 MARK2Q7KZI7 788 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 DSG4Q86SJ6 1040 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SPATA5L1Q9BVQ7 753 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SSR3Q9UNL2 185 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 MED24O75448 989 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 CASP5P51878 434 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 Q4G0T1 1027 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 IRAK1BP1Q5VVH5 260 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 MCOLN2Q8IZK6 566 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 VPS45Q9NRW7 570 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SPIDRQ14159 915 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ARMC8Q8IUR7 673 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 AKAP7Q9P0M2 348 aaPredicted RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 PPIEQ9UNP9 301 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SNRPB2P08579 225 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 NTSP30990 170 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 MTTPP55157 894 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ACAP1Q15027 740 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 AENQ8WTP8 325 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 LACRTQ9GZZ8 138 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 KBTBD4Q9NVX7 518 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 A0A0X1KG70 313 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ANTXR2P58335 489 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 CTXN3Q4LDR2 81 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 PGBD2Q6P3X8 592 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 RBM44Q6ZP01 1051 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 PHF10Q8WUB8 498 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 SLC5A5Q92911 643 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 VPS35Q96QK1 796 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 OSBPL11Q9BXB4 747 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 CIPCQ9C0C6 399 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 NINJ2Q9NZG7 142 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 PTGFRNQ9P2B2 879 aa14.17□□□□□ -0.14
COL4A3-202ENST00000396578 HBS1LQ9Y450 684 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
COL4A3-202ENST00000396578 STX16-NPEPL1H3BU86 382 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 STX16O14662 325 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ALOX5P09917 674 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 TPH1P17752 444 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 OMPP47874 163 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 MOXD1Q6UVY6 613 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 RASSF6Q6ZTQ3 369 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 ABRAQ8N0Z2 381 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 QRFPRQ96P65 431 aa14.16□□□□□ -0.14
COL4A3-202ENST00000396578 FAM126AQ9BYI3 521 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms