RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DUSP3P51452 185 aaPredicted RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 SNX16P57768 344 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 DAB2P98082 770 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 CNTN1Q12860 1018 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 DLG2Q15700 870 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 BROXQ5VW32 411 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 RRAGAQ7L523 313 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 DCP2Q8IU60 420 aaKnown RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 FMR1NBQ8N0W7 255 aaPredicted RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 TMEM145Q8NBT3 493 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 GRAMD1AQ96CP6 724 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 SRRTQ9BXP5 876 aaKnown RBP18■□□□□ 0.47
EXOSC3-202ENST00000396521 ASNSD1Q9NWL6 643 aa18■□□□□ 0.47
EXOSC3-202ENST00000396521 ERVH48-1M5A8F1 160 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 DXOO77932 396 aaKnown RBP17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 CLDN6P56747 220 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 PCBP4P57723 403 aaKnown RBP17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 ERVPABLB-1P60509 514 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 KRT83P78385 493 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 RHDQ02161 417 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 EFHC1Q5JVL4 640 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 ACBD5Q5T8D3 534 aaPredicted RBP17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 CXorf57Q6NSI4 855 aaKnown RBP17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 SLC25A45Q8N413 288 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 KAT5Q92993 513 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 TIGD1Q96MW7 591 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 RPRD1AQ96P16 312 aaPredicted RBP17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 DEPDC7Q96QD5 511 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 LGMNQ99538 433 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 DUSP23Q9BVJ7 150 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 NCKIPSDQ9NZQ3 722 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 VPS28Q9UK41 221 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 SARDHQ9UL12 918 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 HS3ST2Q9Y278 367 aa17.99■□□□□ 0.47
EXOSC3-202ENST00000396521 ARID1BQ8NFD5 2236 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 CFAP46Q8IYW2 2715 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 BICDL2A1A5D9 508 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 TRIM49BA6NDI0 452 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 TRIM38O00635 465 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 C1QL1O75973 258 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 THEGLP0DJG4 465 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 CKMT1AP12532 417 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 KRT5P13647 590 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 VAV1P15498 845 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 DGKAP23743 735 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 AKT2P31751 481 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 KCNMA1Q12791 1236 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 FBXL22Q6P050 247 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 SPACA3Q8IXA5 215 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 SH2D3CQ8N5H7 860 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 TMIEQ8NEW7 156 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF606Q8WXB4 792 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 ALG14Q96F25 216 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 C2orf49Q9BVC5 232 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 DYRK4Q9NR20 520 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 DDIT4Q9NX09 232 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 TBC1D30Q9Y2I9 924 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 PLXNA2O75051 1894 aa17.98■□□□□ 0.47
EXOSC3-202ENST00000396521 E5RJQ4 531 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 HSF2BPO75031 334 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 SDC3O75056 442 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 LETM1O95202 739 aaPredicted RBP17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 PRNPP04156 253 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 PRB1P04280 392 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 LSSP48449 732 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 CLCN6P51797 869 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 KCNH2Q12809 1159 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 AUHQ13825 339 aaKnown RBP17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 DENND1BQ6P3S1 775 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 HORMAD1Q86X24 394 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 ZNF843Q8N446 348 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 FAM181AQ8N9Y4 354 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 KREMEN1Q96MU8 473 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 NOX5Q96PH1 765 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 SLC2A13Q96QE2 648 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 DPH1Q9BZG8 443 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 NLGN3Q9NZ94 848 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 OR51B4Q9Y5P0 310 aa17.97■□□□□ 0.47
EXOSC3-202ENST00000396521 OPA1O60313 960 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 PLA2G2AP14555 144 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 HNRNPA2B1P22626 353 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 CDH4P55283 916 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 TMPRSS3P57727 454 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 HNRNPKP61978 463 aaKnown RBP eCLIP17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 CXADRP78310 365 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 CFHR1Q03591 330 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 PDCLQ13371 301 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 C5orf22Q49AR2 442 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 PIP5KL1Q5T9C9 394 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 CDCP2Q5VXM1 449 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 KDM7AQ6ZMT4 941 aa17.96■□□□□ 0.47
EXOSC3-202ENST00000396521 Q6ZVU0 165 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms