RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SYCE1Q8N0S2 351 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 LZTR1Q8N653 840 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 MYO19Q96H55 970 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 HHIPQ96QV1 700 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 ACE2Q9BYF1 805 aaPredicted RBP19.65■□□□□ 0.74
HOXA9-202ENST00000396345 TMEM245Q9H330 911 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 POLMQ9NP87 494 aaPredicted RBP19.65■□□□□ 0.74
HOXA9-202ENST00000396345 LZTFL1Q9NQ48 299 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 SLCO3A1Q9UIG8 710 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 HPCAL4Q9UM19 191 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.65■□□□□ 0.74
HOXA9-202ENST00000396345 RAD54BQ9Y620 910 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 K7ESF4 209 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 SYNCRIPO60506 623 aaKnown RBP19.64■□□□□ 0.73
HOXA9-202ENST00000396345 HLA-EP13747 358 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 VASPP50552 380 aaPredicted RBP19.64■□□□□ 0.73
HOXA9-202ENST00000396345 STARD3Q14849 445 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 TSSK4Q6SA08 328 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 TMCO3Q6UWJ1 677 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 CAMKK1Q8N5S9 505 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 ZNF366Q8N895 744 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 TSTD1Q8NFU3 115 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 ERLEC1Q96DZ1 483 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 HMCESQ96FZ2 354 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 CELF6Q96J87 481 aaKnown RBP19.64■□□□□ 0.73
HOXA9-202ENST00000396345 KLC2Q9H0B6 622 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 LRRC19Q9H756 370 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 ETNK2Q9NVF9 386 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 SUN2Q9UH99 717 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 AMFRQ9UKV5 643 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 MFHAS1Q9Y4C4 1052 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 NUP205Q92621 2012 aa19.64■□□□□ 0.73
HOXA9-202ENST00000396345 A0A1W2PQF6 199 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 ARHGAP42A6NI28 874 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 C3orf70A6NLC5 250 aaPredicted RBP19.63■□□□□ 0.73
HOXA9-202ENST00000396345 TTC34A8MYJ7 566 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 ZMPSTE24O75844 475 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 APBB3O95704 486 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 TDGF1P13385 188 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 RETSATQ6NUM9 610 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 LINGO4Q6UY18 593 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 PEX26Q7Z412 305 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 NT5DC3Q86UY8 548 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 VSIG1Q86XK7 387 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 KATNAL2Q8IYT4 538 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 NPWQ8N729 165 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 PCDH19Q8TAB3 1148 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 RNF25Q96BH1 459 aaPredicted RBP19.63■□□□□ 0.73
HOXA9-202ENST00000396345 FAF2Q96CS3 445 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 SLC39A8Q9C0K1 460 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 CAPN6Q9Y6Q1 641 aa19.63■□□□□ 0.73
HOXA9-202ENST00000396345 TCRBV21S2A2A0A5A6 115 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ZNF487B1APH4 448 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 KDELR3O43731 214 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ALDH1A2O94788 518 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 MT-CO1P00395 513 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 CTNNA2P26232 953 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 CTNNA1P35221 906 aaKnown RBP19.62■□□□□ 0.73
HOXA9-202ENST00000396345 SERPINB6P35237 376 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 MARCKSL1P49006 195 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ARF5P84085 180 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 SLC20A2Q08357 652 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 SERINC3Q13530 473 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 HNRNPA1L2Q32P51 320 aaKnown RBP19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ACCSLQ4AC99 568 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 AFMIDQ63HM1 303 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 KIAA1211LQ6NV74 962 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ARHGAP12Q8IWW6 846 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 SH2D3CQ8N5H7 860 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 ATP11CQ8NB49 1132 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 NETO2Q8NC67 525 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 PRSS33Q8NF86 280 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 KRT35Q92764 455 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 RNF157Q96PX1 679 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 MAK16Q9BXY0 300 aaKnown RBP19.62■□□□□ 0.73
HOXA9-202ENST00000396345 HS3ST2Q9Y278 367 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 PCDHA3Q9Y5H8 950 aa19.62■□□□□ 0.73
HOXA9-202ENST00000396345 CKAP5Q14008 2032 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 EDDM13A0A1B0GTR0 161 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 CCDC66A2RUB6 948 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ZSCAN5CA6NGD5 496 aaPredicted RBP19.61■□□□□ 0.73
HOXA9-202ENST00000396345 DFFAO00273 331 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ZBTB24O43167 697 aaPredicted RBP19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ATP9BO43861 1147 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ZRANB2O95218 330 aaKnown RBP eCLIP19.61■□□□□ 0.73
HOXA9-202ENST00000396345 FTCDO95954 541 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 SP9P0CG40 484 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 SRCP12931 536 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 HOXA6P31267 233 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 PAPOLAP51003 745 aaKnown RBP19.61■□□□□ 0.73
HOXA9-202ENST00000396345 NRLP54845 237 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 GEMIN4P57678 1058 aaKnown RBP19.61■□□□□ 0.73
HOXA9-202ENST00000396345 DLG2Q15700 870 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ZNF528Q3MIS6 628 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 ANO7Q6IWH7 933 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 MFSD7Q6UXD7 560 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 RCOR2Q8IZ40 523 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 PQLC3Q8N755 202 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 KCNH6Q9H252 994 aa19.61■□□□□ 0.73
HOXA9-202ENST00000396345 MTG2Q9H4K7 406 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms