RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PRPF18Q99633 342 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC4A5Q9BY07 1137 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 CAB39LQ9H9S4 337 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 PPM1HQ9ULR3 514 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 VCLP18206 1134 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 CCNFP41002 786 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 ADCYAP1R1P41586 468 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 LHX1P48742 406 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 FSTL1Q12841 308 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 GPC2Q8N158 579 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 PYROXD2Q8N2H3 581 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 CNDP1Q96KN2 507 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 CCDC138Q96M89 665 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 RBBP8Q99708 897 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 MKS1Q9NXB0 559 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 ETAA1Q9NY74 926 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 POMPQ9Y244 141 aa11.88□□□□□ -0.51
UBE2D3-209ENST00000394804 GLTPD2A6NH11 291 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GNGT2O14610 69 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ITM2AO43736 263 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 IL1BP01584 269 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 LTFP02788 710 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 PTPN1P18031 435 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 PEX2P28328 305 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 PRDX6P30041 224 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 MRPS5P82675 430 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF470Q6ECI4 717 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 OLFML1Q6UWY5 402 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 TIFABQ6ZNK6 161 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 TMEM110Q86TL2 294 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF483Q8TF39 744 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ING2Q9H160 280 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 WDR55Q9H6Y2 383 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GID8Q9NWU2 228 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC17A6Q9P2U8 582 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 MYH9P35579 1960 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 TSPAN1O60635 241 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 LGR5O75473 907 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 C22orf31O95567 290 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ABL2P42684 1182 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 STXBP5Q5T5C0 1151 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 TIGD7Q6NT04 549 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 IFNEQ86WN2 208 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 UNC5BQ8IZJ1 945 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 KCTD4Q8WVF5 259 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 C18orf25Q96B23 403 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 CLIC5Q9NZA1 410 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 C15orf38-AP3S2A0A0A6YYH1 394 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GM2AP17900 193 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 MPSTP25325 297 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 AXLP30530 894 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GTF2A2P52657 109 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 PLOD1Q02809 727 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 INCA1Q0VD86 236 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 FASTKQ14296 549 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 C9orf57Q5W0N0 161 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ISLR2Q6UXK2 745 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ARPINQ7Z6K5 226 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF567Q8N184 647 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 MRPL46Q9H2W6 279 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 ANGPTL3Q9Y5C1 460 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
UBE2D3-209ENST00000394804 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 GSTA4O15217 222 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 SNX2O60749 519 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 PHEXP78562 749 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 NSUN2Q08J23 767 aaKnown RBP eCLIP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ARHGAP17Q68EM7 881 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ZBTB49Q6ZSB9 765 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 SPATA2LQ8IUW3 424 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 UBR7Q8N806 425 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF781Q8N8C0 355 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 LENG8Q96PV6 779 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 GRIP2Q9C0E4 1043 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TRPC7Q9HCX4 862 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 RBM22Q9NW64 420 aaKnown RBP eCLIP11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 TPST1O60507 370 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ARIH2O95376 493 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ETS2P15036 469 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 GRIK1P39086 918 aa11.86□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF235Q14590 738 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms