RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 HS3ST4Q9Y661 456 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 FNDC1Q4ZHG4 1894 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 MICAL3Q7RTP6 2002 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 SLC12A8A0AV02 714 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TLDC2A0PJX2 215 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 CFAP69A5D8W1 941 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 KCNU1A8MYU2 1149 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 KCNK1O00180 336 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TEX28O15482 410 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TLR5O60602 858 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TMEM63AO94886 807 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 APRTP07741 180 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PAX7P23759 505 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 SKIV2L2P42285 1042 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 MAGEA4P43358 317 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ALDH1A3P47895 512 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 HCAR3P49019 387 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TUBP50607 506 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PPARDQ03181 441 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PAFAH1B3Q15102 231 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 PDK1Q15118 436 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 RBBP5Q15291 538 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 BRMS1LQ5PSV4 323 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 FNBP1LQ5T0N5 605 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 AP1ARQ63HQ0 302 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 HEATR6Q6AI08 1181 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 TRMT10CQ7L0Y3 403 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 BZW1Q7L1Q6 419 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 CPLX4Q7Z7G2 160 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 C14orf80Q86SX3 495 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 NAT8LQ8N9F0 302 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 CCDC63Q8NA47 563 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 DEPDC1BQ8WUY9 529 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 HTR3CQ8WXA8 447 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 RTP4Q96DX8 246 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 P2RY11Q96G91 374 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 SLC39A13Q96H72 371 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 XPO6Q96QU8 1125 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 HAPLN3Q96S86 360 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 GAS2L1Q99501 681 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 HERC2P3Q9BVR0 1158 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 GRIP2Q9C0E4 1043 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ALG13Q9NP73 1137 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 PPANQ9NQ55 473 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 MPP6Q9NZW5 540 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ZMYND8Q9ULU4 1186 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 SHOC2Q9UQ13 582 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 NLRC5Q86WI3 1866 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 LAMA3Q16787 3333 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 E9PAM4 449 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 RNF103O00237 685 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 MSTNO14793 375 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 AHCYL1O43865 530 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 AVILO75366 819 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 GCATO75600 419 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 SMNDC1O75940 238 aaKnown RBP eCLIP7.11□□□□□ -1.272e-15■■■□□ 16
RTN4-205ENST00000394609 METTL18O95568 372 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TTC4O95801 387 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 FESP07332 822 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 FBXO45P0C2W1 286 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 LINC00271P0C7V0 271 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 HMGA1P17096 107 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 SLCO1A2P46721 670 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 MAP2K3P46734 347 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 KCNQ1P51787 676 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 HTRA4P83105 476 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 TWF1Q12792 350 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 POU4F2Q12837 409 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PDIA2Q13087 525 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 NR1H3Q13133 447 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PLD1Q13393 1074 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 BLMHQ13867 455 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 RAB33AQ14088 237 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 NAA25Q14CX7 972 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PRKD1Q15139 912 aaPredicted RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 TAF12Q16514 161 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 HIF1AQ16665 826 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 KRT71Q3SY84 523 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PIK3R6Q5UE93 754 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 TPGS2Q68CL5 300 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 MSANTD2Q6P1R3 559 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 CAPN12Q6ZSI9 719 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PCGF5Q86SE9 256 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ANKMY2Q8IV38 441 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ZBED8Q8IZ13 594 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 GTPBP3Q969Y2 492 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
RTN4-205ENST00000394609 NACA2Q9H009 215 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 ETNK1Q9HBU6 452 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PRM3Q9NNZ6 103 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 NDFIP2Q9NV92 336 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 NINJ2Q9NZG7 142 aa7.11□□□□□ -1.27
RTN4-205ENST00000394609 PAK5Q9P286 719 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms