RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 PTPN7P35236 360 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 GABRB2P47870 512 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 PKNOX1P55347 436 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 RPL10AP62906 217 aaKnown RBP10.17□□□□□ -0.78
PSEN1-204ENST00000394164 YWHAZP63104 245 aaKnown RBP10.17□□□□□ -0.78
PSEN1-204ENST00000394164 TGFBIQ15582 683 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 CCL14Q16627 93 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 KCNT2Q6UVM3 1135 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 XKR5Q6UX68 686 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 PACS1Q6VY07 963 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 ADGRG6Q86SQ4 1221 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 CLVS1Q8IUQ0 354 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-204ENST00000394164 TSPAN14Q8NG11 270 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 KCNN1Q92952 543 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 MAML3Q96JK9 1138 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 TBCBQ99426 244 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 HEPHQ9BQS7 1158 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 FOXP3Q9BZS1 431 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 SNX25Q9H3E2 840 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 SSU72Q9NP77 194 aaKnown RBP10.17□□□□□ -0.78
PSEN1-204ENST00000394164 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 AP4E1Q9UPM8 1137 aa10.17□□□□□ -0.78
PSEN1-204ENST00000394164 J3QRK9 145 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 DCXO43602 365 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SIN3BO75182 1162 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 CTSHP09668 335 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 PIM1P11309 404 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 KCNA4P22459 653 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 TKTP29401 623 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 ABCG1P45844 678 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 NR1H2P55055 460 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 INCA1Q0VD86 236 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 ADIGQ0VDE8 80 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 STX3Q13277 289 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 OGFRL1Q5TC84 451 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SLC27A1Q6PCB7 646 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 ZSCAN18Q8TBC5 510 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 FBXL8Q96CD0 374 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 AGAP3Q96P47 875 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 BTBD9Q96Q07 612 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 TINF2Q9BSI4 451 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 GCOM2Q9BZD3 368 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SPON1Q9HCB6 807 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 ACSS2Q9NR19 701 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SMYD2Q9NRG4 433 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 PNPOQ9NVS9 261 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 APOBEC2Q9Y235 224 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SMIM28A0A1B0GU29 152 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 KANSL1LA0AUZ9 987 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 FUOMA2VDF0 154 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SDR42E2A6NKP2 422 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 CCNT2O60583 730 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 USP12O75317 370 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 FUCA1P04066 466 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 CYP2B6P20813 491 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 MRPS5P82675 430 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 IFRD2Q12894 506 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 PPP2R5DQ14738 602 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 TWF2Q6IBS0 349 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SLC2A7Q6PXP3 512 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 LRRC43Q8N309 656 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 LINC01465Q8N7H1 131 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 ARRDC4Q8NCT1 418 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 BEST2Q8NFU1 509 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 DEPDC1BQ8WUY9 529 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 SLC35F5Q8WV83 523 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 MED10Q9BTT4 135 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 NRDE2Q9H7Z3 1164 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 PLGRKTQ9HBL7 147 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 XAB2Q9HCS7 855 aaKnown RBP10.16□□□□□ -0.78
PSEN1-204ENST00000394164 VTA1Q9NP79 307 aa10.16□□□□□ -0.78
PSEN1-204ENST00000394164 K7EPI3 171 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 KLHL41O60662 606 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 CSPG5O95196 566 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 OXSR1O95747 527 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-204ENST00000394164 GRM5P41594 1212 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 PRAMEP78395 509 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 KCNJ11Q14654 390 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 FAM187BQ17R55 369 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 FBXO47Q5MNV8 452 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 RARS2Q5T160 578 aaKnown RBP10.15□□□□□ -0.78
PSEN1-204ENST00000394164 CCDC80Q76M96 950 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 CAND1Q86VP6 1230 aaKnown RBP10.15□□□□□ -0.78
PSEN1-204ENST00000394164 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 DEFB106AQ8N104 65 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 NDUFAF2Q8N183 169 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 FBXW8Q8N3Y1 598 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 FAM156AQ8NDB6 213 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
PSEN1-204ENST00000394164 IRGQQ8WZA9 623 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 PPP1R14BQ96C90 147 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 ZNF778Q96MU6 729 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 KCTD15Q96SI1 283 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-204ENST00000394164 OSBPL6Q9BZF3 934 aa10.15□□□□□ -0.78
PSEN1-204ENST00000394164 PPME1Q9Y570 386 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms