RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GJB7Q6PEY0 223 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 SH2D3CQ8N5H7 860 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 NT5C3BQ969T7 300 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 PGAP3Q96FM1 320 aaPredicted RBP17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 KIAA1468Q9P260 1216 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 HS3ST4Q9Y661 456 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 FAM149AA5PLN7 773 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 PRAMEF26H0Y7S4 382 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 JUPP14923 745 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 SCNN1AP37088 669 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 USP8P40818 1118 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 KRT83P78385 493 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 STAT4Q14765 748 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 SETMARQ53H47 684 aaPredicted RBP17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 C6orf118Q5T5N4 469 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 FAM183BPQ6ZVS7 135 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 SPATS2Q86XZ4 545 aaKnown RBP17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 EID2Q8N6I1 236 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 OR52K2Q8NGK3 314 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 PIP4K2CQ8TBX8 421 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 NXPE2Q96DL1 559 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 CCDC114Q96M63 670 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 NPY6RQ99463 290 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 ARHGEF38Q9NXL2 777 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 VPS28Q9UK41 221 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 VANGL2Q9ULK5 521 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 FARP1Q9Y4F1 1045 aaPredicted RBP17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 PAXBP1Q9Y5B6 917 aa17.96■□□□□ 0.47
SNRPA1-202ENST00000394082 M0QYT0 321 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 RTN2O75298 545 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 PAGE1O75459 146 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 F9P00740 461 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 CKMT2P17540 419 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 KRT9P35527 623 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 CXCR3P49682 368 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 CLCN6P51797 869 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 METAP1P53582 386 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 BPIFB4P59827 614 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 CENPCQ03188 943 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 CNTN1Q12860 1018 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 RTP5Q14D33 572 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 ACCSLQ4AC99 568 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 SOWAHCQ53LP3 525 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 FBXL19Q6PCT2 694 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 SETD3Q86TU7 594 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 IRF2BP1Q8IU81 584 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 TMEM145Q8NBT3 493 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 TMIEQ8NEW7 156 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 HNRNPLLQ8WVV9 542 aaKnown RBP17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 RFFLQ8WZ73 363 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 C1orf74Q96LT6 269 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 C2orf49Q9BVC5 232 aaPredicted RBP17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 NRSN2Q9GZP1 204 aa17.95■□□□□ 0.46
SNRPA1-202ENST00000394082 SYNJ2BP-COX16A0A087WUM0 186 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 GRAP2O75791 330 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 ERBB2P04626 1255 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 ZNF18P17022 549 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 ACP1P24666 158 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 CDH5P33151 784 aaPredicted RBP17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 TAS2R38P59533 333 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 BNIP3Q12983 259 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 DNAJC3Q13217 504 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 NME3Q13232 169 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 PTPN20Q4JDL3 420 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 CCDC157Q569K6 752 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 Q6ZVU0 165 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 FAM71AQ8IYT1 594 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 ZNF683Q8IZ20 524 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 FAM174AQ8TBP5 190 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 WDCPQ9H6R7 721 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 SIX2Q9NPC8 291 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 COX16Q9P0S2 106 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 STAP1Q9ULZ2 295 aa17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 ARID1BQ8NFD5 2236 aaPredicted RBP17.94■□□□□ 0.46
SNRPA1-202ENST00000394082 CXorf51AA0A1B0GTR3 108 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 DRGXA6NNA5 263 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 PLK4O00444 970 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 SRCP12931 536 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 CLCN1P35523 988 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 GABRB2P47870 512 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 IRAK1P51617 712 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 PIP5KL1Q5T9C9 394 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 OTUD1Q5VV17 481 aaPredicted RBP17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 C14orf80Q86SX3 495 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 PASD1Q8IV76 773 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 DCAF4L2Q8NA75 395 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 MLKLQ8NB16 471 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 OR2A12Q8NGT7 310 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 MUC3BQ9H195 1237 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 SYNCQ9H7C4 482 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 PIGVQ9NUD9 493 aa17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNRPA1-202ENST00000394082 IGLV3-10A0A075B6K4 115 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 CBX4O00257 560 aa17.92■□□□□ 0.46
SNRPA1-202ENST00000394082 FOXN3O00409 490 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms