RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GLOD4Q9HC38 313 aa8.82□□□□□ -1
TDP1-203ENST00000393454 HCFC1R1Q9NWW0 138 aa8.82□□□□□ -1
TDP1-203ENST00000393454 CTNNAL1Q9UBT7 734 aa8.82□□□□□ -1
TDP1-203ENST00000393454 LSM7Q9UK45 103 aaKnown RBP8.82□□□□□ -1
TDP1-203ENST00000393454 OBSL1O75147 1896 aa8.82□□□□□ -1
TDP1-203ENST00000393454 SDR42E2A6NKP2 422 aa8.82□□□□□ -1
TDP1-203ENST00000393454 PER2O15055 1255 aa8.82□□□□□ -1
TDP1-203ENST00000393454 USP12O75317 370 aa8.82□□□□□ -1
TDP1-203ENST00000393454 TCEA3O75764 348 aa8.82□□□□□ -1
TDP1-203ENST00000393454 AP2A1O95782 977 aa8.82□□□□□ -1
TDP1-203ENST00000393454 AGTP01019 485 aa8.82□□□□□ -1
TDP1-203ENST00000393454 MLNP12872 115 aa8.82□□□□□ -1
TDP1-203ENST00000393454 EPCAMP16422 314 aa8.82□□□□□ -1
TDP1-203ENST00000393454 MGAT1P26572 445 aa8.82□□□□□ -1
TDP1-203ENST00000393454 ACVRL1P37023 503 aa8.82□□□□□ -1
TDP1-203ENST00000393454 RENBPP51606 427 aa8.82□□□□□ -1
TDP1-203ENST00000393454 CDH4P55283 916 aa8.82□□□□□ -1
TDP1-203ENST00000393454 YBEYP58557 167 aaPredicted RBP8.82□□□□□ -1
TDP1-203ENST00000393454 GABPB1Q06547 395 aaPredicted RBP8.82□□□□□ -1
TDP1-203ENST00000393454 OLIG2Q13516 323 aa8.82□□□□□ -1
TDP1-203ENST00000393454 TMED2Q15363 201 aa8.82□□□□□ -1
TDP1-203ENST00000393454 PARP15Q460N3 678 aa8.82□□□□□ -1
TDP1-203ENST00000393454 IL31Q6EBC2 164 aa8.82□□□□□ -1
TDP1-203ENST00000393454 LEKR1Q6ZMV7 388 aa8.82□□□□□ -1
TDP1-203ENST00000393454 RBM23Q86U06 439 aaKnown RBP8.82□□□□□ -1
TDP1-203ENST00000393454 AGGF1Q8N302 714 aaeCLIP8.82□□□□□ -1
TDP1-203ENST00000393454 MPP5Q8N3R9 675 aa8.82□□□□□ -1
TDP1-203ENST00000393454 DNAAF3Q8N9W5 541 aa8.82□□□□□ -1
TDP1-203ENST00000393454 OR52K1Q8NGK4 314 aa8.82□□□□□ -1
TDP1-203ENST00000393454 ZSCAN18Q8TBC5 510 aaPredicted RBP8.82□□□□□ -1
TDP1-203ENST00000393454 LRRC39Q96DD0 335 aa8.82□□□□□ -1
TDP1-203ENST00000393454 SIGLEC10Q96LC7 697 aa8.82□□□□□ -1
TDP1-203ENST00000393454 XPO6Q96QU8 1125 aaKnown RBP8.82□□□□□ -1
TDP1-203ENST00000393454 IL12RB2Q99665 862 aa8.82□□□□□ -1
TDP1-203ENST00000393454 EBNA1BP2Q99848 306 aaKnown RBP8.82□□□□□ -1
TDP1-203ENST00000393454 SPON2Q9BUD6 331 aa8.82□□□□□ -1
TDP1-203ENST00000393454 LRRC3Q9BY71 257 aa8.82□□□□□ -1
TDP1-203ENST00000393454 NT5MQ9NPB1 228 aa8.82□□□□□ -1
TDP1-203ENST00000393454 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
TDP1-203ENST00000393454 GBF1Q92538 1859 aa8.82□□□□□ -1
TDP1-203ENST00000393454 CEP290O15078 2479 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.81□□□□□ -1
TDP1-203ENST00000393454 CCDC85CA6NKD9 419 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ERI2A8K979 691 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 PSMD3O43242 534 aa8.81□□□□□ -1
TDP1-203ENST00000393454 CLASP2O75122 1294 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 CDH16O75309 829 aa8.81□□□□□ -1
TDP1-203ENST00000393454 CLDN11O75508 207 aa8.81□□□□□ -1
TDP1-203ENST00000393454 SPAG6O75602 509 aa8.81□□□□□ -1
TDP1-203ENST00000393454 PIAS1O75925 651 aa8.81□□□□□ -1
TDP1-203ENST00000393454 HLA-DQB2P05538 268 aa8.81□□□□□ -1
TDP1-203ENST00000393454 RHOCP08134 193 aa8.81□□□□□ -1
TDP1-203ENST00000393454 TSHRP16473 764 aa8.81□□□□□ -1
TDP1-203ENST00000393454 PTPN2P17706 415 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ATP5DP30049 168 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ETFBP38117 255 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MAGEA3P43357 314 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MMP13P45452 471 aa8.81□□□□□ -1
TDP1-203ENST00000393454 SGSHP51688 502 aa8.81□□□□□ -1
TDP1-203ENST00000393454 PPP2R2AP63151 447 aa8.81□□□□□ -1
TDP1-203ENST00000393454 CRADDP78560 199 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ZNF177Q13360 481 aaPredicted RBP8.81□□□□□ -1
TDP1-203ENST00000393454 SERINC3Q13530 473 aa8.81□□□□□ -1
TDP1-203ENST00000393454 CAMK1Q14012 370 aa8.81□□□□□ -1
TDP1-203ENST00000393454 EFTUD2Q15029 972 aaKnown RBP eCLIP8.81□□□□□ -12e-8■■■■■ 57.6
TDP1-203ENST00000393454 KLHL38Q2WGJ6 581 aa8.81□□□□□ -1
TDP1-203ENST00000393454 C5orf22Q49AR2 442 aa8.81□□□□□ -1
TDP1-203ENST00000393454 STXBP5Q5T5C0 1151 aa8.81□□□□□ -1
TDP1-203ENST00000393454 GPR158Q5T848 1215 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ZNF697Q5TEC3 545 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MARC1Q5VT66 337 aa8.81□□□□□ -1
TDP1-203ENST00000393454 KDM7AQ6ZMT4 941 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ARFGAP2Q8N6H7 521 aa8.81□□□□□ -1
TDP1-203ENST00000393454 SPATA22Q8NHS9 363 aa8.81□□□□□ -1
TDP1-203ENST00000393454 TLCD1Q96CP7 247 aa8.81□□□□□ -1
TDP1-203ENST00000393454 STAMBPL1Q96FJ0 436 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 PRICKLE1Q96MT3 831 aaPredicted RBP8.81□□□□□ -1
TDP1-203ENST00000393454 SAMD11Q96NU1 681 aa8.81□□□□□ -1
TDP1-203ENST00000393454 SELENOSQ9BQE4 189 aa8.81□□□□□ -1
TDP1-203ENST00000393454 APOL2Q9BQE5 337 aa8.81□□□□□ -1
TDP1-203ENST00000393454 GORASP1Q9BQQ3 440 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MLPHQ9BV36 600 aaPredicted RBP8.81□□□□□ -1
TDP1-203ENST00000393454 LRRC40Q9H9A6 602 aa8.81□□□□□ -1
TDP1-203ENST00000393454 CFAP97Q9P2B7 532 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ZNF212Q9UDV6 495 aa8.81□□□□□ -1
TDP1-203ENST00000393454 AAR2Q9Y312 384 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 SH3BP1Q9Y3L3 701 aa8.81□□□□□ -1
TDP1-203ENST00000393454 DENND4CQ5VZ89 1909 aa8.81□□□□□ -1
TDP1-203ENST00000393454 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
TDP1-203ENST00000393454 A0A0D9SEW6 157 aa8.81□□□□□ -1
TDP1-203ENST00000393454 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 TBL1XO60907 577 aa8.81□□□□□ -1
TDP1-203ENST00000393454 ANXA9O76027 345 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MT-CYBP00156 380 aaPredicted RBP8.81□□□□□ -1
TDP1-203ENST00000393454 PBX2P40425 430 aa8.81□□□□□ -1
TDP1-203ENST00000393454 MSH2P43246 934 aa8.81□□□□□ -1
TDP1-203ENST00000393454 GEMIN4P57678 1058 aaKnown RBP8.81□□□□□ -1
TDP1-203ENST00000393454 GNA12Q03113 381 aa8.81□□□□□ -1
TDP1-203ENST00000393454 IL10RBQ08334 325 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms