RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PPARGC1AQ9UBK2 798 aaKnown RBP7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC25A13Q9UJS0 675 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 ANAPC7Q9UJX3 599 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 AP4E1Q9UPM8 1137 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 SCINQ9Y6U3 715 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
HMGB3P1-201ENST00000393368 DCHS1Q96JQ0 3298 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 A0A1W2PP55 124 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ILVBLA1L0T0 632 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 NDUFS2O75306 463 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF217O75362 1048 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 LRCH4O75427 683 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZMPSTE24O75844 475 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 DNTTP04053 509 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 CYP1A2P05177 515 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 MYBL1P10243 752 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 RHOQP17081 205 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 IL1R2P27930 398 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 EPHB2P29323 1055 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 L1CAMP32004 1257 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 GJC1P36383 396 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF75DP51815 510 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 OXCT1P55809 520 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 NRG1Q02297 640 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 GNA12Q03113 381 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SULT2A1Q06520 285 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF33AQ06730 810 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 TBX2Q13207 712 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SEMA3BQ13214 749 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 TRIM14Q14142 442 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 E2F5Q15329 346 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 DLG2Q15700 870 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 CST6Q15828 149 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 CSRP2Q16527 193 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 RSPO4Q2I0M5 234 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ASTE1Q2TB18 679 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 AASDHQ4L235 1098 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 PPP6R3Q5H9R7 873 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF776Q68DI1 518 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 IL31Q6EBC2 164 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SARM1Q6SZW1 724 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 C11orf74Q86VG3 221 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF354CQ86Y25 554 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SH2D3CQ8N5H7 860 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 AADATQ8N5Z0 425 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 DCAF4L2Q8NA75 395 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 CHST14Q8NCH0 376 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 HSPH1Q92598 858 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 RMDN1Q96DB5 314 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 CELF6Q96J87 481 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 LOXL4Q96JB6 756 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 FAM129BQ96TA1 746 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 EPAS1Q99814 870 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 C2orf49Q9BVC5 232 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 PABPC3Q9H361 631 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 DEF6Q9H4E7 631 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 C6orf106Q9H6K1 298 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 NOL6Q9H6R4 1146 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZWILCHQ9H900 591 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 NHEJ1Q9H9Q4 299 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 MRPL47Q9HD33 250 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMEM248Q9NWD8 314 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 WSB2Q9NYS7 404 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SUN2Q9UH99 717 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SARDHQ9UL12 918 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 MFHAS1Q9Y4C4 1052 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLCO1B1Q9Y6L6 691 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 OTOGLQ3ZCN5 2332 aa7.85□□□□□ -1.15
HMGB3P1-201ENST00000393368 TARSL2A2RTX5 802 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 FAM47DPA6NHR8 397 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMEM110-MUSTN1A8MSY1 372 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 MEI4A8MW99 385 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 AKR1B15C9JRZ8 316 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 EEF2KO00418 725 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ATP9BO43861 1147 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 AKR1B10O60218 316 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 PRPSAP2O60256 369 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 RAMP2O60895 175 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF821O75541 412 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 RNASEH2AO75792 299 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 RNF8O76064 485 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 CD160O95971 181 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 IL1BP01584 269 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 CTSLP07711 333 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TPM1P09493 284 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF806P0C7X5 589 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 GOT1P17174 413 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 GKP32189 559 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SLC8A1P32418 973 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 NNMTP40261 264 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 SSR1P43307 286 aaKnown RBP7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 TPI1P60174 286 aa7.84□□□□□ -1.15
HMGB3P1-201ENST00000393368 KRT83P78385 493 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms