RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RAB33AQ14088 237 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 TMEM240Q5SV17 173 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ATP6V0D2Q8N8Y2 350 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 PABPC5Q96DU9 382 aaKnown RBP15.28■□□□□ 0.04
MKS1-202ENST00000393119 BRD8Q9H0E9 1235 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 GBA3Q9H227 469 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 CD248Q9HCU0 757 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.04
MKS1-202ENST00000393119 DNMT3LQ9UJW3 386 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 GOLGA8TH3BQL2 631 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 FAM107AO95990 144 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 PEX11BO96011 259 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 TACR2P21452 398 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 GLDCP23378 1020 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 PHBP35232 272 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 MSH2P43246 934 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 CYP4F8P98187 520 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 HECTD3Q5T447 861 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 KCTD11Q693B1 232 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 LRRC8BQ6P9F7 803 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 UBE2Q1Q7Z7E8 422 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 PNPLA1Q8N8W4 532 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 MZB1Q8WU39 189 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 SERAC1Q96JX3 654 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 CCT8L2Q96SF2 557 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 KLC4Q9NSK0 619 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 INTS9Q9NV88 658 aaKnown RBP15.27■□□□□ 0.04
MKS1-202ENST00000393119 INSL5Q9Y5Q6 135 aa15.27■□□□□ 0.04
MKS1-202ENST00000393119 ZFP37Q9Y6Q3 630 aaPredicted RBP15.27■□□□□ 0.04
MKS1-202ENST00000393119 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.04
MKS1-202ENST00000393119 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 CLGNO14967 610 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 NCAM2O15394 837 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 FGF10O15520 208 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 CXCL14O95715 111 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 CHRNA4P43681 627 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 ABCG1P45844 678 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 ADGRD1Q6QNK2 874 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 CEP128Q6ZU80 1094 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 TMC7Q7Z402 723 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 FIBCD1Q8N539 461 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 ARFGAP2Q8N6H7 521 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 ARL14EPQ8N8R7 260 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 DNAAF3Q8N9W5 541 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 MAGEC3Q8TD91 643 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 SLC22A17Q8WUG5 538 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 STAMBPL1Q96FJ0 436 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 PRICKLE1Q96MT3 831 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 SMG9Q9H0W8 520 aaKnown RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 PSMC3IPQ9P2W1 217 aaPredicted RBP15.27■□□□□ 0.03
MKS1-202ENST00000393119 GRID1Q9ULK0 1009 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 PSAT1Q9Y617 370 aa15.27■□□□□ 0.03
MKS1-202ENST00000393119 SMAPO00193 183 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 PMPCBO75439 489 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 STC2O76061 302 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 AP2A1O95782 977 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 TOP3BO95985 862 aaKnown RBP15.26■□□□□ 0.03
MKS1-202ENST00000393119 SLC2A3P11169 496 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 KRT4P19013 534 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 CCNCP24863 283 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 OR1E1P30953 314 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 CORO1AP31146 461 aaKnown RBP15.26■□□□□ 0.03
MKS1-202ENST00000393119 ELF1P32519 619 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 RPA3P35244 121 aaPredicted RBP15.26■□□□□ 0.03
MKS1-202ENST00000393119 PCSK7Q16549 785 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 IPMKQ8NFU5 416 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 CYTH2Q99418 400 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 ZBP1Q9H171 429 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 CHRAC1Q9NRG0 131 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 OLA1Q9NTK5 396 aaKnown RBP15.26■□□□□ 0.03
MKS1-202ENST00000393119 TRPM5Q9NZQ8 1165 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 NDC80O14777 642 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 MATN3O15232 486 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 PGGT1BP53609 377 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
MKS1-202ENST00000393119 FPGSQ05932 587 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 PLPP4Q5VZY2 271 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 OR7D4Q8NG98 312 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 MFSD3Q96ES6 412 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 C17orf80Q9BSJ5 609 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 NT5MQ9NPB1 228 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 TMEM248Q9NWD8 314 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 HCFC1R1Q9NWW0 138 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 PCDHB12Q9Y5F1 795 aa15.26■□□□□ 0.03
MKS1-202ENST00000393119 IGLV3-10A0A075B6K4 115 aa15.25■□□□□ 0.03
MKS1-202ENST00000393119 CCDC189A1A4V9 331 aa15.25■□□□□ 0.03
MKS1-202ENST00000393119 HMX2A2RU54 273 aa15.25■□□□□ 0.03
MKS1-202ENST00000393119 SDR42E2A6NKP2 422 aa15.25■□□□□ 0.03
MKS1-202ENST00000393119 RHOQP17081 205 aa15.25■□□□□ 0.03
MKS1-202ENST00000393119 SLC1A5Q15758 541 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms