RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DAOAP59103 153 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 DR1Q01658 176 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 MRPL58Q14197 206 aaKnown RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ESX1Q8N693 406 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 CMASQ8NFW8 434 aaPredicted RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ARHGEF2Q92974 986 aaKnown RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 MTUS1Q9ULD2 1270 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 NLRC5Q86WI3 1866 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 A0A088AWK7 358 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 KRT7P08729 469 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 FGFR3P22607 806 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 GPR15P49685 360 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ARPP19P56211 112 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 COG7P83436 770 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 MYLK3Q32MK0 819 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 CTXN3Q4LDR2 81 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 EFHC1Q5JVL4 640 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 SPDYAQ5MJ70 313 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 OTOP2Q7RTS6 562 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ADAM32Q8TC27 787 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 CENPIQ92674 756 aaPredicted RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 STMN2Q93045 179 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 VN1R3Q9BXE9 311 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 MRPL9Q9BYD2 267 aaKnown RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 TMPRSS4Q9NRS4 437 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ZDHHC18Q9NUE0 388 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 ANGPTL2Q9UKU9 493 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 COQ6Q9Y2Z9 468 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 SYNJ2BP-COX16A0A087WUM0 186 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 KIAA0355O15063 1070 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 MTRF1O75570 445 aaKnown RBP19.38■□□□□ 0.69
CCDC50-202ENST00000392456 UBL4AP11441 157 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 MATKP42679 507 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 DYNLT1P63172 113 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 CDC16Q13042 620 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 TFDP3Q5H9I0 405 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 C16orf59Q7L2K0 433 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 SPATA2LQ8IUW3 424 aaPredicted RBP19.38■□□□□ 0.69
CCDC50-202ENST00000392456 KCTD6Q8NC69 237 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 TGS1Q96RS0 853 aaKnown RBP19.38■□□□□ 0.69
CCDC50-202ENST00000392456 LRRC19Q9H756 370 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 DDX56Q9NY93 547 aaKnown RBP19.38■□□□□ 0.69
CCDC50-202ENST00000392456 COX16Q9P0S2 106 aa19.38■□□□□ 0.69
CCDC50-202ENST00000392456 SYN3O14994 580 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PRPSAP2O60256 369 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 SMIM18P0DKX4 95 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PTPN2P17706 415 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 CHRNA3P32297 505 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 SCNN1AP37088 669 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PTPN9P43378 593 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 BCAP31P51572 246 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 IFRD2Q12894 506 aaPredicted RBP19.37■□□□□ 0.69
CCDC50-202ENST00000392456 CLUL1Q15846 466 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PRSS55Q6UWB4 352 aaPredicted RBP19.37■□□□□ 0.69
CCDC50-202ENST00000392456 JAMLQ86YT9 394 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 DCLK3Q9C098 648 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 CHD7Q9P2D1 2997 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PTPRDP23468 1912 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 ARHGEF37A1IGU5 675 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 SOAT2O75908 522 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 GRIK1P39086 918 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 ZBTB17Q13105 803 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 AUHQ13825 339 aaKnown RBP19.37■□□□□ 0.69
CCDC50-202ENST00000392456 DDR2Q16832 855 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 MFSD5Q6N075 450 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 ARCQ7LC44 396 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PRUNE1Q86TP1 453 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 GPR152Q8TDT2 470 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 EDEM1Q92611 657 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 SPATA17Q96L03 361 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 CRISPLD1Q9H336 500 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 EBF3Q9H4W6 596 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PLGRKTQ9HBL7 147 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 PCYOX1Q9UHG3 505 aa19.37■□□□□ 0.69
CCDC50-202ENST00000392456 SF3B1O75533 1304 aaKnown RBP eCLIP19.37■□□□□ 0.693e-6■■■■■ 137.9
CCDC50-202ENST00000392456 TMEM120BA0PK00 339 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 PGM3O95394 542 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 IL4RP24394 825 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 RPL5P46777 297 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 ALDH7A1P49419 539 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 WDR5P61964 334 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 TUBA1BP68363 451 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 ANKDD1AQ495B1 522 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 PPP2R2DQ66LE6 453 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 VSTM1Q6UX27 236 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 TUBA1AQ71U36 451 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 FAM131BQ86XD5 332 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 SCN4BQ8IWT1 228 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 CCDC185Q8N715 623 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 C12orf50Q8NA57 414 aaPredicted RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 EPS8L3Q8TE67 593 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 SNRNP25Q9BV90 132 aaKnown RBP19.36■□□□□ 0.69
CCDC50-202ENST00000392456 CALN1Q9BXU9 219 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 MCOLN1Q9GZU1 580 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 CNGB3Q9NQW8 809 aa19.36■□□□□ 0.69
CCDC50-202ENST00000392456 DMTF1Q9Y222 760 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms