RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SHBQ15464 509 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 ARTNQ5T4W7 220 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 TBC1D3GQ6DHY5 549 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 TBC1D3CQ6IPX1 549 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 LINGO4Q6UY18 593 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 PHLDB2Q86SQ0 1253 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 ERICH1Q86X53 443 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 TBC1D3Q8IZP1 549 aaPredicted RBP17.03■□□□□ 0.32
PTPRK-208ENST00000392449 SH2D3CQ8N5H7 860 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 NT5C3BQ969T7 300 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 C18orf8Q96DM3 657 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 SERAC1Q96JX3 654 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 CFAP57Q96MR6 1250 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 DACH1Q9UI36 760 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 TBC1D30Q9Y2I9 924 aa17.03■□□□□ 0.32
PTPRK-208ENST00000392449 DSPP15924 2871 aaKnown RBP17.03■□□□□ 0.32
PTPRK-208ENST00000392449 A0A0D9SEW6 157 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 A0A1W2PR77 199 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CAPNS1P04632 268 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 RHOCP08134 193 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 GLDCP23378 1020 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 RRM1P23921 792 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CD38P28907 300 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CCR5P51681 352 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CDH4P55283 916 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 SNX16P57768 344 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 SCAPQ12770 1279 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CNTN1Q12860 1018 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 SFSWAPQ12872 951 aaKnown RBP17.02■□□□□ 0.32
PTPRK-208ENST00000392449 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CCNI2Q6ZMN8 369 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-208ENST00000392449 ZDHHC17Q8IUH5 632 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 EPS8L1Q8TE68 723 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 OR8D1Q8WZ84 308 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CDC6Q99741 560 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 VPS16Q9H269 839 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 GANQ9H2C0 597 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 VPS51Q9UID3 782 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 PPM1HQ9ULR3 514 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 STAP1Q9ULZ2 295 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 CA5BQ9Y2D0 317 aa17.02■□□□□ 0.32
PTPRK-208ENST00000392449 A0A1B0GTQ1 180 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 EPHB6O15197 1021 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 SMAD6O43541 496 aaKnown RBP17.01■□□□□ 0.31
PTPRK-208ENST00000392449 PCDHGA12O60330 932 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 CTSLP07711 333 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 SRCP12931 536 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 ZNF18P17022 549 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 GRK6P43250 576 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 OXCT1P55809 520 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 NOMO3P69849 1222 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 SUZ12Q15022 739 aaKnown RBP17.01■□□□□ 0.31
PTPRK-208ENST00000392449 SLC25A52Q3SY17 297 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 BRMS1LQ5PSV4 323 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 AGBL4Q5VU57 503 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 EMC1Q8N766 993 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 FAM131CQ96AQ9 280 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 ELF4Q99607 663 aaPredicted RBP17.01■□□□□ 0.31
PTPRK-208ENST00000392449 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 ZFYVE26Q68DK2 2539 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 DOCK4Q8N1I0 1966 aa17.01■□□□□ 0.31
PTPRK-208ENST00000392449 FAM149AA5PLN7 773 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 E9PAM4 449 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 LATO43561 262 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 PLRG1O43660 514 aaKnown RBP17■□□□□ 0.31
PTPRK-208ENST00000392449 SRGAP2O75044 1071 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 GFPT2O94808 682 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 DKK1O94907 266 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 GJB6O95452 261 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 FAM131BQ86XD5 332 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 ATP11CQ8NB49 1132 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 OR7D4Q8NG98 312 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 MDM1Q8TC05 714 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 PGAP3Q96FM1 320 aaPredicted RBP17■□□□□ 0.31
PTPRK-208ENST00000392449 STK33Q9BYT3 514 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 CAAP1Q9H8G2 361 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
PTPRK-208ENST00000392449 RRN3Q9NYV6 651 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 TMEM59LQ9UK28 342 aa17■□□□□ 0.31
PTPRK-208ENST00000392449 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
PTPRK-208ENST00000392449 MCF2LO15068 1137 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ENDOD1O94919 500 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 EEF1GP26641 437 aaKnown RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 VASPP50552 380 aaPredicted RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 CLDN6P56747 220 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 TAS2R38P59533 333 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 ATP11AP98196 1134 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 KRT31Q15323 416 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 DSG4Q86SJ6 1040 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 SPATS2Q86XZ4 545 aaKnown RBP16.99■□□□□ 0.31
PTPRK-208ENST00000392449 CHST14Q8NCH0 376 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 OR2A12Q8NGT7 310 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 KLK6Q92876 244 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 MYOCQ99972 504 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 TNKS2Q9H2K2 1166 aa16.99■□□□□ 0.31
PTPRK-208ENST00000392449 NLRC4Q9NPP4 1024 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms