RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ERVW-1Q9UQF0 538 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 HCN4Q9Y3Q4 1203 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 STON1Q9Y6Q2 735 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 DUSP10Q9Y6W6 482 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 MIA3Q5JRA6 1907 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 A0A0D9SEW6 157 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CCDC66A2RUB6 948 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ARHGAP42A6NI28 874 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 MIF4GDA9UHW6 222 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 K7ESF4 209 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 BUB1O43683 1085 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 KDELR3O43731 214 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ATP9BO43861 1147 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ADAM23O75077 832 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ZRANB2O95218 330 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 APBB3O95704 486 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 EPHX1P07099 455 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 HOXB2P14652 356 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 KDELR1P24390 212 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 IL4RP24394 825 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CNR2P34972 360 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 SERPINB6P35237 376 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 IL12RB1P42701 662 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 PTPN5P54829 565 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TAS2R40P59535 323 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 COPS2P61201 443 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 SATB1Q01826 763 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CSTF1Q05048 431 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 SFSWAPQ12872 951 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 SERINC3Q13530 473 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CAMK2GQ13555 558 aaPredicted RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 BYSLQ13895 437 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 DPYSQ14117 519 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 PTPRNQ16849 979 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 HNRNPA1L2Q32P51 320 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ATP13A4Q4VNC1 1196 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 FNDC3BQ53EP0 1204 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 INO80DQ53TQ3 878 aaPredicted RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ZFYVE27Q5T4F4 411 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TMCO4Q5TGY1 634 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 DAB2IPQ5VWQ8 1189 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 IL31Q6EBC2 164 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 PKN3Q6P5Z2 889 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TMCO3Q6UWJ1 677 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ZSCAN30Q86W11 494 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 RASSF3Q86WH2 238 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 RCOR2Q8IZ40 523 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 MAML2Q8IZL2 1156 aaPredicted RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TSTD1Q8NFU3 115 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 OR52K2Q8NGK3 314 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TSC1Q92574 1164 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 NELL1Q92832 810 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ISG20Q96AZ6 181 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 FAF2Q96CS3 445 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 MYO19Q96H55 970 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 MRGPRX3Q96LB0 322 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CCDC114Q96M63 670 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ACOX2Q99424 681 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 DESI2Q9BSY9 194 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CALN1Q9BXU9 219 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 MAK16Q9BXY0 300 aaKnown RBP6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 LRRC19Q9H756 370 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ATP13A1Q9HD20 1204 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 NDFIP2Q9NV92 336 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 CACNA2D2Q9NY47 1150 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 AMFRQ9UKV5 643 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 TFR2Q9UP52 801 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 ZKSCAN5Q9Y2L8 839 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 PCDHA3Q9Y5H8 950 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 KIAA1549LQ6ZVL6 1849 aa6.92□□□□□ -1.3
UBBP1-201ENST00000392399 DOCK4Q8N1I0 1966 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 EDDM13A0A1B0GTR0 161 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 A0A1W2PQF6 199 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 MACROD2A1Z1Q3 448 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 LRRD1A4D1F6 860 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 WASH3PC4AMC7 463 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RASA4BC9J798 803 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 CBX4O00257 560 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 DCLK1O15075 740 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZSCAN12O43309 604 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RASA4O43374 803 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RNASEH1O60930 286 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZMPSTE24O75844 475 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 SP9P0CG40 484 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 TDGF1P13385 188 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 AMPD1P23109 780 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 CTNNA2P26232 953 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 CTNNA1P35221 906 aaKnown RBP6.91□□□□□ -1.3
UBBP1-201ENST00000392399 CETN2P41208 172 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 ZBTB16Q05516 673 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 TFDP2Q14188 446 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 DPYSL3Q14195 570 aa6.91□□□□□ -1.3
UBBP1-201ENST00000392399 RFTN1Q14699 578 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms