RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 EFNB1P98172 346 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CEBPZQ03701 1054 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ABHD18Q0P651 414 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 SMAD4Q13485 552 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CAPSQ13938 189 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 C15orf59Q2T9L4 293 aaPredicted RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 KIAA0930Q6ICG6 404 aaPredicted RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 MINDY1Q8N5J2 469 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 DENND6BQ8NEG7 585 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CEP76Q8TAP6 659 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 NEK9Q8TD19 979 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 NETO1Q8TDF5 533 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 C1orf74Q96LT6 269 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 FAM118BQ9BPY3 351 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CLSTN3Q9BQT9 956 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 SSBP4Q9BWG4 385 aaPredicted RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CTDSP1Q9GZU7 261 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CLPBQ9H078 707 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 NT5C3AQ9H0P0 336 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 FBRSL1Q9HCM7 1045 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 RRP7BPQ9NSQ0 103 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ABCB8Q9NUT2 735 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CHCHD3Q9NX63 227 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 FBXL17Q9UF56 701 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 FETUBQ9UGM5 382 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 AMACRQ9UHK6 382 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 RAB21Q9UL25 225 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 TRPC5Q9UL62 973 aaPredicted RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 HPCAL4Q9UM19 191 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PCDHA5Q9Y5H7 936 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 A2ML1A8K2U0 1454 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PLXNC1O60486 1568 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 DEPDC5O75140 1603 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3DA0A087WVF3 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3IA0A087WXS9 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3EA0A087X179 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3KA0A087X1G2 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 A0A1W2PQF6 199 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 HMX2A2RU54 273 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3BA6NDS4 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3FA6NER0 549 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3LB9A6J9 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ADAMDEC1O15204 470 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TLR2O60603 784 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 PAGE4O60829 102 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 INHBAP08476 426 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 CCDC159P0C7I6 412 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3HP0C7X1 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZNF8P17098 575 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 HK1P19367 917 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 KCNA5P22460 613 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 RBL1P28749 1068 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 LUMP51884 338 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 LILRA4P59901 499 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 PRR5P85299 388 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZBTB16Q05516 673 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 BNIP3Q12983 259 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 FRG1Q14331 258 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 OASLQ15646 514 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 AAK1Q2M2I8 961 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 RUNDC3AQ59EK9 446 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TMEM196Q5HYL7 178 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ADGRF1Q5T601 910 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD40Q6AI12 368 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3GQ6DHY5 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3CQ6IPX1 549 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 MTHFD1LQ6UB35 978 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZNF574Q6ZN55 896 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 GPRIN1Q7Z2K8 1008 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ADCK1Q86TW2 530 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZC3H18Q86VM9 953 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZDHHC14Q8IZN3 488 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TBC1D3Q8IZP1 549 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 FSTL5Q8N475 847 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 PLD5Q8N7P1 536 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 RTL3Q8N8U3 475 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 MIGA1Q8NAN2 632 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 XXYLT1Q8NBI6 393 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 CADM4Q8NFZ8 388 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 CORO2AQ92828 525 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZBTB45Q96K62 511 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 TMEM209Q96SK2 561 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 EIF3CQ99613 913 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 SRSF8Q9BRL6 282 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 NTPCRQ9BSD7 190 aaKnown RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 CRACR2AQ9BSW2 395 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 SLC25A23Q9BV35 468 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 MLPHQ9BV36 600 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 STRA6Q9BX79 667 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 HSD3B7Q9H2F3 369 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZBTB40Q9NUA8 1239 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 WSB2Q9NYS7 404 aaPredicted RBP6.69□□□□□ -1.34
TRAV35-201ENST00000390462 LRIT1Q9P2V4 623 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 EXTL2Q9UBQ6 330 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 MKLN1Q9UL63 735 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms