RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 UHRF1Q96T88 793 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 C1orf50Q9BV19 199 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 WDR55Q9H6Y2 383 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 NOL11Q9H8H0 719 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 POLR1BQ9H9Y6 1135 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 SIAEQ9HAT2 523 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 TMEM216Q9P0N5 145 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 TMEM9Q9P0T7 183 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 PAK5Q9P286 719 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 KLHL3Q9UH77 587 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 C1orf232A0A0U1RR37 186 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 CKMT2P17540 419 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 MYF6P23409 242 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 PSMA2P25787 234 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 GRSF1Q12849 480 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 TDRD10Q5VZ19 366 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 FAM117BQ6P1L5 589 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 CHSY3Q70JA7 882 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 CPSF7Q8N684 471 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 SAMD3Q8N6K7 520 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 ASB9Q96DX5 294 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 ALPK1Q96QP1 1244 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 EBNA1BP2Q99848 306 aaKnown RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 FAM213AQ9BRX8 229 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 EFCAB1Q9HAE3 211 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 RNF146Q9NTX7 359 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 RBAKQ9NYW8 714 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 DAPK2Q9UIK4 370 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 TIMM22Q9Y584 194 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 UBIAD1Q9Y5Z9 338 aa14.93□□□□□ -0.02
VPS9D1-201ENST00000389386 TMEM114B3SHH9 223 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 VWA5AO00534 786 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 VAPBO95292 243 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 VNN1O95497 513 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 C4BPAP04003 597 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 YWHABP31946 246 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 ENPEPQ07075 957 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 NME3Q13232 169 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 NOMO1Q15155 1222 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 SCARA3Q6AZY7 606 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 FRA10AC1Q70Z53 315 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 GPD1LQ8N335 351 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 MPP5Q8N3R9 675 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 KCTD6Q8NC69 237 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 LPAR1Q92633 364 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 PDCD2LQ9BRP1 358 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 MOCS1Q9NZB8 636 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 SEPT3Q9UH03 358 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 TCEAL9Q9UHQ7 104 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 WDR64B1ANS9 1081 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 SOCS2O14508 198 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 SLC22A2O15244 555 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 HSPA4LO95757 839 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 APRTP07741 180 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 TCEA1P23193 301 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 MAGEA6P43360 314 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 MLLT10P55197 1068 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 TRIM25Q14258 630 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 HADHQ16836 314 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 CYP4A22Q5TCH4 519 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 NAPRTQ6XQN6 538 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 MCF2L2Q86YR7 1114 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 APOBEC3FQ8IUX4 373 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 ADAM32Q8TC27 787 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 PGBD4Q96DM1 585 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 ZNF385DQ9H6B1 395 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 NANOGQ9H9S0 305 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 ZFYVE28Q9HCC9 887 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 ADARB2Q9NS39 739 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 SMOXQ9NWM0 555 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 NXF1Q9UBU9 619 aaKnown RBP14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 POU2F3Q9UKI9 436 aa14.92□□□□□ -0.02
VPS9D1-201ENST00000389386 DLGAP1O14490 977 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 MAGEA3P43357 314 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 CLDN10P78369 228 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 PRKCQQ04759 706 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 HERC3Q15034 1050 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 TAF5Q15542 800 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 INSCQ1MX18 579 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 XKR9Q5GH70 373 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 FAM47CQ5HY64 1035 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 PPM1JQ5JR12 505 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 FAM102BQ5T8I3 360 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 C14orf80Q86SX3 495 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 KLHL25Q9H0H3 589 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 PCDHAC1Q9H158 963 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 XPNPEP3Q9NQH7 507 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 PXMP2Q9NR77 195 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 PCDHA11Q9Y5I1 949 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 DOCK5Q9H7D0 1870 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 TADA2AO75478 443 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 RSL1D1O76021 490 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 CLPXO76031 633 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 CCNA2P20248 432 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 ADORA2AP29274 412 aa14.91□□□□□ -0.02
VPS9D1-201ENST00000389386 SLC7A1P30825 629 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms