RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DSEQ9UL01 958 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 PMM2O15305 246 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 GEMP55040 296 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FRMD7Q6ZUT3 714 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 HERC6Q8IVU3 1022 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 TERB1Q8NA31 727 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 PTCD3Q96EY7 689 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 AP5M1Q9H0R1 490 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 UTP6Q9NYH9 597 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SELENONQ9NZV5 590 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FCGR1AP12314 374 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 TFEBP19484 476 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 TSPY1Q01534 308 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DLG2Q15700 870 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 RELL1Q8IUW5 271 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 CDT1Q9H211 546 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 RBM22Q9NW64 420 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DNAJB4Q9UDY4 337 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 LINC00854A0A1B0GVQ3 168 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 KANSL1LA0AUZ9 987 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 TMEM114B3SHH9 223 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 NPY2RP49146 381 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 C1orf220Q5T0J3 134 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 UTS2BQ765I0 119 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SNX31Q8N9S9 440 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FNIP1Q8TF40 1166 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 NSMCE2Q96MF7 247 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 ASB7Q9H672 318 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 UBQLN1Q9UMX0 589 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FAM149AA5PLN7 773 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 KCNU1A8MYU2 1149 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 METTL18O95568 372 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 PRKAA2P54646 552 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 POU4F1Q01851 419 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 DMC1Q14565 340 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 RGS21Q2M5E4 152 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SV2CQ496J9 727 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 ATP6AP1LQ52LC2 224 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 LRTOMTQ8WZ04 291 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 LPGAT1Q92604 370 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 BDH2Q9BUT1 245 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 LHX5Q9H2C1 402 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 RNF112Q9ULX5 631 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
TRAPPC9-201ENST00000389328 FER1L4A9Z1Z3 1794 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 H3BSA7 217 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 MYL3P08590 195 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 INSRRP14616 1297 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ITGAXP20702 1163 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 PSMB9P28065 219 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 IREB2P48200 963 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC39A4Q6P5W5 647 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 PDSS2Q86YH6 399 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ADGRF2Q8IZF7 708 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 MIER2Q8N344 545 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 PIM2Q9P1W9 311 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ANKRD6Q9Y2G4 727 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 NFKB1P19838 968 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 CHRM3P20309 590 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 CRABP2P29373 138 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 GRIK1P39086 918 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 PPP1R26Q5T8A7 1209 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 STYK1Q6J9G0 422 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 FBXO27Q8NI29 283 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 FIZ1Q96SL8 496 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 YDJCA8MPS7 323 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 TK2O00142 265 aa13.34□□□□□ -0.27
TRAPPC9-201ENST00000389328 TOMM70O94826 608 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms