RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 LGMNQ99538 433 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 PRMT1Q99873 361 aaKnown RBP16.44■□□□□ 0.22
VCX3A-201ENST00000381089 DYRK4Q9NR20 520 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 DDIT4Q9NX09 232 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 VPS28Q9UK41 221 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 SARDHQ9UL12 918 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 PPM1HQ9ULR3 514 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 CNTN6Q9UQ52 1028 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 RAI2Q9Y5P3 530 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 ARID1BQ8NFD5 2236 aaPredicted RBP16.43■□□□□ 0.22
VCX3A-201ENST00000381089 KALRNO60229 2985 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 THAP12O43422 761 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 BNIP3LO60238 219 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 GLI1P08151 1106 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 THEGLP0DJG4 465 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 GNA15P30679 374 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 AKT2P31751 481 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 METAP1P53582 386 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 KRT83P78385 493 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 DLG2Q15700 870 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 POM121L1PQ3SYA9 428 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 EFHC1Q5JVL4 640 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 CXorf57Q6NSI4 855 aaKnown RBP16.43■□□□□ 0.22
VCX3A-201ENST00000381089 Q6ZVU0 165 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 ENOSF1Q7L5Y1 443 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF605Q86T29 641 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 LSMEM2Q8N112 164 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF248Q8NDW4 579 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 OR4C6Q8NH72 309 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 FAM81BQ96LP2 452 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 FEM1AQ9BSK4 669 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
VCX3A-201ENST00000381089 HSF2BPO75031 334 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 CLDN11O75508 207 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 UCNP55089 124 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 PCBP4P57723 403 aaKnown RBP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 SNX16P57768 344 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 CXADRP78310 365 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 TLE3Q04726 772 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 PDCLQ13371 301 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 KLHL10Q6JEL2 608 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 FBXL22Q6P050 247 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 SPACA3Q8IXA5 215 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 SH2D3CQ8N5H7 860 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 FAM174AQ8TBP5 190 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF606Q8WXB4 792 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 KREMEN1Q96MU8 473 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF578Q96N58 590 aaPredicted RBP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 NOX5Q96PH1 765 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 DEPDC7Q96QD5 511 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 ASNSD1Q9NWL6 643 aa16.42■□□□□ 0.22
VCX3A-201ENST00000381089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
VCX3A-201ENST00000381089 NEMP2A6NFY4 417 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 KPNA3O00505 521 aaPredicted RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 TRIM38O00635 465 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 SLC31A1O15431 190 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 C1QL1O75973 258 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 HNRNPA2B1P22626 353 aaKnown RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 DGKAP23743 735 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 DUSP3P51452 185 aaPredicted RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 CENPCQ03188 943 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 EIF4EBP2Q13542 120 aaPredicted RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 AUHQ13825 339 aaKnown RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 FOXR2Q6PJQ5 311 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 ERICH1Q86X53 443 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 SLC25A45Q8N413 288 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 TMEM145Q8NBT3 493 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
VCX3A-201ENST00000381089 CALN1Q9BXU9 219 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 USP29Q9HBJ7 922 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 VANGL2Q9ULK5 521 aa16.41■□□□□ 0.22
VCX3A-201ENST00000381089 A0A1W2PQU0 124 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 FFAR2O15552 330 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 PRNPP04156 253 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 CKMT1AP12532 417 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 PRLRP16471 622 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 CHRNA3P32297 505 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 CDH4P55283 916 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 TMPRSS3P57727 454 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 PITX1P78337 314 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-201ENST00000381089 NME3Q13232 169 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 TAF1BQ53T94 588 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-201ENST00000381089 ISM2Q6H9L7 571 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 TMC6Q7Z403 805 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 HORMAD1Q86X24 394 aa16.4■□□□□ 0.22
VCX3A-201ENST00000381089 DCP2Q8IU60 420 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms