RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 USP13Q92995 863 aaPredicted RBP11.84□□□□□ -0.51
PITRM1-202ENST00000380989 APOPT1Q96IL0 206 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 FAM193BQ96PV7 902 aaPredicted RBP11.84□□□□□ -0.51
PITRM1-202ENST00000380989 CCDC106Q9BWC9 280 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 ZNF518BQ9C0D4 1074 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 HMX2A2RU54 273 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 E9PBE3 544 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 MED7O43513 233 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 KLHL41O60662 606 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 ASLP04424 464 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 TFAP2AP05549 437 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 FGFR3P22607 806 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 NDUFV1P49821 464 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 CMPK2Q5EBM0 449 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 KLHDC10Q6PID8 442 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 LCA5Q86VQ0 697 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 RELL1Q8IUW5 271 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 PCED1BQ96HM7 432 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 MED10Q9BTT4 135 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 UNKQ9C0B0 810 aaKnown RBP11.84□□□□□ -0.51
PITRM1-202ENST00000380989 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 TANC1Q9C0D5 1861 aa11.84□□□□□ -0.51
PITRM1-202ENST00000380989 ANKRD12Q6UB98 2062 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DCXO43602 365 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 SMIM18P0DKX4 95 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 RBP3P10745 1247 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 SLC11A1P49279 550 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 PKNOX1P55347 436 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 MAP3K7CLP57077 242 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DSC1Q08554 894 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TRNP1Q6NT89 227 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 FAM183BPQ6ZVS7 135 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 CENPKQ9BS16 269 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 ATXN10Q9UBB4 475 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 SLC24A2Q9UI40 661 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DNAJC16Q9Y2G8 782 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 GABRDO14764 452 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 CXCL10P02778 98 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 APRTP07741 180 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DHRS4L1P0CG22 281 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 PSMD7P51665 324 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 ARPP19P56211 112 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 MRPS22P82650 360 aaKnown RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 CYTH1Q15438 398 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 MYLK3Q32MK0 819 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 AMIGO2Q86SJ2 522 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 XYLT1Q86Y38 959 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 ST13P4Q8IZP2 240 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 URGCPQ8TCY9 931 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 FAM172AQ8WUF8 416 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 RAB6BQ9NRW1 208 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TADA2AO75478 443 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 SUPT3HO75486 399 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TFE3P19532 575 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 STT3AP46977 705 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 RAP1GDS1P52306 607 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 IFRD2Q12894 506 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 NRF1Q16656 503 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 PLEKHA7Q6IQ23 1121 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 TRIM72Q6ZMU5 477 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 GPRIN1Q7Z2K8 1008 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 PDIK1LQ8N165 341 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
PITRM1-202ENST00000380989 BBOF1Q8ND07 529 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 SPATA18Q8TC71 538 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 DOLKQ9UPQ8 538 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 ZNF711Q9Y462 761 aa11.83□□□□□ -0.52
PITRM1-202ENST00000380989 A0A0J9YVX5 310 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 TCRBV5S1A1TA0A578 114 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 NEMP1O14524 444 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 CFLARO15519 480 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 WARSP23381 471 aaKnown RBP11.82□□□□□ -0.52
PITRM1-202ENST00000380989 RPL9P32969 192 aaKnown RBP11.82□□□□□ -0.52
PITRM1-202ENST00000380989 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
PITRM1-202ENST00000380989 ANKDD1AQ495B1 522 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 KCTD21Q4G0X4 260 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 LIN9Q5TKA1 542 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 SDHAF4Q5VUM1 108 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 IL31Q6EBC2 164 aa11.82□□□□□ -0.52
PITRM1-202ENST00000380989 C16orf59Q7L2K0 433 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms