RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ITGB6P18564 788 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 AKT2P31751 481 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 MXI1P50539 228 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 SRSF6Q13247 344 aaKnown RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 DRAP1Q14919 205 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF284Q2VY69 593 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 PIP5KL1Q5T9C9 394 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 PMF1Q6P1K2 205 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF574Q6ZN55 896 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 Q6ZVU0 165 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 CIR1Q86X95 450 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ARL14Q8N4G2 192 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 FBXL13Q8NEE6 735 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ZNF548Q8NEK5 533 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 GRAMD1AQ96CP6 724 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 SLC39A13Q96H72 371 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ANKMY1Q9P2S6 941 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 SERTAD1Q9UHV2 236 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 ATXN7L1Q9ULK2 861 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-203ENST00000380748 TLR6Q9Y2C9 796 aa17.84■□□□□ 0.45
HMGN1-203ENST00000380748 FAM87AP0C7U9 286 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 HNRNPA2B1P22626 353 aaKnown RBP17.83■□□□□ 0.44
HMGN1-203ENST00000380748 GTF2H1P32780 548 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 PDX1P52945 283 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMGN1-203ENST00000380748 ENPEPQ07075 957 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 ACCSLQ4AC99 568 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 OR6B2Q6IFH4 312 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 ZCCHC8Q6NZY4 707 aaKnown RBP17.83■□□□□ 0.44
HMGN1-203ENST00000380748 ABI3BPQ7Z7G0 1075 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 CHSY1Q86X52 802 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 CEP57L1Q8IYX8 460 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 WDR36Q8NI36 951 aaKnown RBP17.83■□□□□ 0.44
HMGN1-203ENST00000380748 IFT43Q96FT9 208 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 PAGE5Q96GU1 130 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 SERPINB11Q96P15 392 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 NBPF19A0A087WUL8 3843 aa17.83■□□□□ 0.44
HMGN1-203ENST00000380748 MCF2LO15068 1137 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 BNIP3LO60238 219 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 VDRP11473 427 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 TACR2P21452 398 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
HMGN1-203ENST00000380748 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 NFIL3Q16649 462 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 PERM1Q5SV97 790 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 Q6ZSR6 202 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 USP53Q70EK8 1073 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 PTAR1Q7Z6K3 402 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-203ENST00000380748 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 HORMAD1Q86X24 394 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 SLC35F5Q8WV83 523 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 TFAP2BQ92481 460 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 ZNF396Q96N95 335 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-203ENST00000380748 MIS12Q9H081 205 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 ZFR2Q9UPR6 939 aaKnown RBP17.82■□□□□ 0.44
HMGN1-203ENST00000380748 NAALADL1Q9UQQ1 740 aa17.82■□□□□ 0.44
HMGN1-203ENST00000380748 SPTAN1Q13813 2472 aaKnown RBP17.82■□□□□ 0.44
HMGN1-203ENST00000380748 EME2A4GXA9 379 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ALOX15BO15296 676 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ACTN4O43707 911 aaKnown RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ATP9BO43861 1147 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 CTSLP07711 333 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ITGA2BP08514 1039 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ZNF18P17022 549 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 MLLT3P42568 568 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 PLK1P53350 603 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 NNTQ13423 1086 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 CUL2Q13617 745 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 SLC12A1Q13621 1099 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 FZD2Q14332 565 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 TGIF1Q15583 401 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 DLG2Q15700 870 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 DEFB133Q30KQ1 61 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 SEL1L3Q68CR1 1132 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 CXorf57Q6NSI4 855 aaKnown RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 LCLAT1Q6UWP7 414 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 ERCC4Q92889 916 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-203ENST00000380748 SGF29Q96ES7 293 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 MAPK8IP1Q9UQF2 711 aa17.81■□□□□ 0.44
HMGN1-203ENST00000380748 MYO9AB2RTY4 2548 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 USP9YO00507 2555 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-203ENST00000380748 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 A6NNZ2 444 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 TCEA3O75764 348 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 AFPP02771 609 aaKnown RBP17.8■□□□□ 0.44
HMGN1-203ENST00000380748 NUCB2P80303 420 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 ADAM9Q13443 819 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 ZC3H12AQ5D1E8 599 aaKnown RBP17.8■□□□□ 0.44
HMGN1-203ENST00000380748 NEK5Q6P3R8 708 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 XKR5Q6UX68 686 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 ALG14Q96F25 216 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 BMFQ96LC9 184 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 ZSWIM1Q9BR11 485 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 GPR27Q9NS67 375 aa17.8■□□□□ 0.44
HMGN1-203ENST00000380748 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms