RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ADAM28Q9UKQ2 775 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 CRYL1Q9Y2S2 319 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 H3BMM5 538 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 BMP10O95393 424 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 TRUB2O95900 331 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 FGFR1P11362 822 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 LBPP18428 481 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 OR52K1Q8NGK4 314 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 STAG3L4Q8TBR4 150 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 RNF157Q96PX1 679 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 DDNO94850 711 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ADCYAP1R1P41586 468 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 POLR2LP62875 67 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ACSM2AQ08AH3 577 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ACSM2BQ68CK6 577 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 C19orf18Q8NEA5 215 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 CERS2Q96G23 380 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 MAN1C1Q9NR34 630 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 CATSPERZQ9NTU4 200 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ZMYM5Q9UJ78 669 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 A0A087WXM4 84 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 MANSC4A6NHS7 340 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ZBTB14O43829 449 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 PSMG1O95456 288 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 LTA4HP09960 611 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 NPR3P17342 541 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 TYMPP19971 482 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 HNRNPH3P31942 346 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 INAQ16352 499 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 FSCN1Q16658 493 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ARMC4Q5T2S8 1044 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 BBS12Q6ZW61 710 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 PHF13Q86YI8 300 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF398Q8TD17 642 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 RNPEPL1Q9HAU8 725 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 SHBGP04278 402 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ITGAVP06756 1048 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 CYP2A6P11509 494 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 LRPAP1P30533 357 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ELF3P78545 371 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 C15orf52Q6ZUT6 534 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 MIEF2Q96C03 454 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 SNRNP25Q9BV90 132 aaKnown RBP16.29■□□□□ 0.2
COL2A1-202ENST00000380518 CEP44Q9C0F1 390 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 ARHGAP28Q9P2N2 729 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 DCCP43146 1447 aa16.29■□□□□ 0.2
COL2A1-202ENST00000380518 NUDT17P0C025 328 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 PTPRAP18433 802 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 FMO1Q01740 532 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 IL27RAQ6UWB1 636 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 CLVS1Q8IUQ0 354 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 FAM126AQ9BYI3 521 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 TK2O00142 265 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 MED26O95402 600 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 PIK3R1P27986 724 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 GRK4P32298 578 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 GRIK3Q13003 919 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 FOXR1Q6PIV2 292 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 UNC5AQ6ZN44 842 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 POLNQ7Z5Q5 900 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 RAD18Q9NS91 495 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF112Q9UJU3 913 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 VWDEQ8N2E2 1590 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 UNC5CO95185 931 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 RPN2P04844 631 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 DGKAP23743 735 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 PKNOX1P55347 436 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 PPIDQ08752 370 aaKnown RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 NEDD8Q15843 81 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 CRY1Q16526 586 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 NKAPQ8N5F7 415 aaKnown RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 ACMSDQ8TDX5 336 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 ART4Q93070 314 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 GGA2Q9UJY4 613 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 MRPS22P82650 360 aaKnown RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 DUPD1Q68J44 220 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 WDR36Q8NI36 951 aaKnown RBP16.28■□□□□ 0.2
COL2A1-202ENST00000380518 TPD52L3Q96J77 140 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 ARL15Q9NXU5 204 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
COL2A1-202ENST00000380518 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ATP5F1P24539 256 aaPredicted RBP16.27■□□□□ 0.2
COL2A1-202ENST00000380518 SERPINA4P29622 427 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 WSCD1Q658N2 575 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 RNF43Q68DV7 783 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 NPNTQ6UXI9 565 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 FAM183BPQ6ZVS7 135 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 VN1R5Q7Z5H4 357 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms