RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SIK2Q9H0K1 926 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 SYNCQ9H7C4 482 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 FARP1Q9Y4F1 1045 aaPredicted RBP23.74■■□□□ 1.39
U2AF1-202ENST00000380276 CELSR3Q9NYQ7 3312 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 PRAMEF26H0Y7S4 382 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 ATP9BO43861 1147 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 RNGTTO60942 597 aaKnown RBP23.73■■□□□ 1.39
U2AF1-202ENST00000380276 FGFR1OPO95684 399 aaKnown RBP23.73■■□□□ 1.39
U2AF1-202ENST00000380276 MORC3Q14149 939 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 SFMBT2Q5VUG0 894 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 FAM183BPQ6ZVS7 135 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 BAP1Q92560 729 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 SLC2A13Q96QE2 648 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 HS3ST4Q9Y661 456 aa23.73■■□□□ 1.39
U2AF1-202ENST00000380276 KPNA3O00505 521 aaPredicted RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 ALOX15BO15296 676 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 SLC31A1O15431 190 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 RHOCP08134 193 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 GLI1P08151 1106 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 PRLRP16471 622 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 GLDCP23378 1020 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 EIF2S3P41091 472 aaKnown RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 MARSP56192 900 aaKnown RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 OVGP1Q12889 678 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 ILKQ13418 452 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 EIF4EBP2Q13542 120 aaPredicted RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 FOXR2Q6PJQ5 311 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 SH2D3CQ8N5H7 860 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 ATP11CQ8NB49 1132 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 C1orf131Q8NDD1 294 aaKnown RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 NOX5Q96PH1 765 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 UBL7Q96S82 380 aaPredicted RBP23.72■■□□□ 1.39
U2AF1-202ENST00000380276 NRSN2Q9GZP1 204 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 PREBQ9HCU5 417 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 DYRK4Q9NR20 520 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 PPM1HQ9ULR3 514 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 CLCA2Q9UQC9 943 aa23.72■■□□□ 1.39
U2AF1-202ENST00000380276 BECN2A8MW95 431 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 M0QYT0 321 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 MCF2LO15068 1137 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 CLDN11O75508 207 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 THEGLP0DJG4 465 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 SLC9A1P19634 815 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 KRT83P78385 493 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 TRIM65Q6PJ69 517 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 KDM7AQ6ZMT4 941 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 C11orf57Q6ZUT1 292 aaPredicted RBP23.71■■□□□ 1.39
U2AF1-202ENST00000380276 KANSL1Q7Z3B3 1105 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 C14orf80Q86SX3 495 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 ELOA2Q8IYF1 753 aaPredicted RBP23.71■■□□□ 1.39
U2AF1-202ENST00000380276 FAM131CQ96AQ9 280 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 ALG14Q96F25 216 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 FAM81BQ96LP2 452 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 CCDC114Q96M63 670 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 CALN1Q9BXU9 219 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 FZD3Q9NPG1 666 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 ASNSD1Q9NWL6 643 aa23.71■■□□□ 1.39
U2AF1-202ENST00000380276 FFAR2O15552 330 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 SIGLEC6O43699 453 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 PAGE1O75459 146 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 APBA1Q02410 837 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 WDTC1Q8N5D0 677 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 MYLKQ15746 1914 aa23.7■■□□□ 1.38
U2AF1-202ENST00000380276 FASNP49327 2511 aaKnown RBP23.69■■□□□ 1.38
U2AF1-202ENST00000380276 A0A1W2PQU0 124 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 BRINP1O60477 761 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 DAB1O75553 588 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 PRB1P04280 392 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 ERBB2P04626 1255 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 SRCP12931 536 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 KRT9P35527 623 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 VASPP50552 380 aaPredicted RBP23.69■■□□□ 1.38
U2AF1-202ENST00000380276 CDH4P55283 916 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 INSM1Q01101 510 aaPredicted RBP23.69■■□□□ 1.38
U2AF1-202ENST00000380276 MTA1Q13330 715 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 RTP5Q14D33 572 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 PROX2Q3B8N5 592 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 GBP6Q6ZN66 633 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 TMC6Q7Z403 805 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 APEX2Q9UBZ4 518 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 LOC400499M0QZD8 3231 aa23.69■■□□□ 1.38
U2AF1-202ENST00000380276 TRIM38O00635 465 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 SNAP91O60641 907 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 CNTN5O94779 1100 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 PCDH8O95206 1070 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 ACP1P24666 158 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 AKT2P31751 481 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 CHRNA3P32297 505 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 SNX16P57768 344 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 TAS2R38P59533 333 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 RNASE9P60153 205 aaKnown RBP23.68■■□□□ 1.38
U2AF1-202ENST00000380276 PTK2Q05397 1052 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 CCDC15Q0P6D6 951 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 BECN1Q14457 450 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 OLFML1Q6UWY5 402 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 FCRL3Q96P31 734 aaPredicted RBP23.68■■□□□ 1.38
U2AF1-202ENST00000380276 C2orf49Q9BVC5 232 aaPredicted RBP23.68■■□□□ 1.38
U2AF1-202ENST00000380276 TKTL2Q9H0I9 626 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 OR51B4Q9Y5P0 310 aa23.68■■□□□ 1.38
U2AF1-202ENST00000380276 RAI2Q9Y5P3 530 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms