RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 EIF4HQ15056 248 aaKnown RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 PTPRRQ15256 657 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ARSIQ5FYB1 569 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 WDR45BQ5MNZ6 344 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ATXN7L2Q5T6C5 722 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CAVIN1Q6NZI2 390 aaKnown RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 SLC36A4Q6YBV0 504 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CCDC117Q8IWD4 279 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 EID2Q8N6I1 236 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 AOPEPQ8N6M6 819 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 FOXJ1Q92949 421 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 NAF1Q96HR8 494 aaKnown RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CALN1Q9BXU9 219 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 RSPH9Q9H1X1 276 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 HSD3B7Q9H2F3 369 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 UCKL1Q9NWZ5 548 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 TOR4AQ9NXH8 423 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 KIAA1522Q9P206 1035 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CREB3O43889 395 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 HSF2BPO75031 334 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 PCDH8O95206 1070 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 MAP3K6O95382 1288 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 MATKP42679 507 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 LIMK1P53667 647 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 TAS2R38P59533 333 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 RING1Q06587 406 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 EIF4EBP2Q13542 120 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 HSF5Q4G112 596 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF776Q68DI1 518 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 DPY19L3Q6ZPD9 716 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF276Q8N554 614 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 KCNV2Q8TDN2 545 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 FRS2Q8WU20 508 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 DNASE2BQ8WZ79 361 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 IRGQQ8WZA9 623 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 SPAG5Q96R06 1193 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 KLC2Q9H0B6 622 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 VPS51Q9UID3 782 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 PCOLCE2Q9UKZ9 415 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 E9PAM4 449 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 LEFTY1O75610 366 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 FGFR1OPO95684 399 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SYPP08247 313 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SKILP12757 684 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SRCP12931 536 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ACADSBP45954 432 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RPL34P49207 117 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 FMO1Q01740 532 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ENPEPQ07075 957 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CYP4F3Q08477 520 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SCAPQ12770 1279 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 BYSLQ13895 437 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TTC31Q49AM3 519 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ANO6Q4KMQ2 910 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 E4F1Q66K89 784 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TMC6Q7Z403 805 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ATP6V0D2Q8N8Y2 350 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 OR2A12Q8NGT7 310 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PIP4K2CQ8TBX8 421 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CPLX3Q8WVH0 158 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RXFP2Q8WXD0 754 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ALG14Q96F25 216 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CELF6Q96J87 481 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SLC2A13Q96QE2 648 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NPY6RQ99463 290 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SLC2A11Q9BYW1 496 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ARHGAP20Q9P2F6 1191 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 OR12D3Q9UGF7 316 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PCSK1NQ9UHG2 260 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RAXQ9Y2V3 346 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 MYO18BQ8IUG5 2567 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NBASA2RRP1 2371 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TNRC6BQ9UPQ9 1833 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PCDH15Q96QU1 1955 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 A0A1B0GVM2 712 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 POM121BA6NF01 834 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TCAF2A6NFQ2 919 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PMM2O15305 246 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF821O75541 412 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RHOCP08134 193 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TCF4P15884 667 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NOS2P35228 1153 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NOMO3P69849 1222 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 STILQ15468 1287 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CCDC14Q49A88 953 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 EFHC1Q5JVL4 640 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TPRG1LQ5T0D9 272 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ARTNQ5T4W7 220 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 KCTD16Q68DU8 428 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms