RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 SMIM31A0A1B0GVY4 71 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 KLRG2A4D1S0 409 aaPredicted RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 NOL3O60936 208 aaKnown RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 SNNO75324 88 aaPredicted RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 TRMUO75648 421 aaKnown RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 FARP2O94887 1054 aaPredicted RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 PGAM1P18669 254 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 TFEBP19484 476 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 ABCD1P33897 745 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 NDUFV1P49821 464 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 PHEXP78562 749 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 CEACAM7Q14002 265 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 GRM3Q14832 879 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 DDIASQ8IXT1 998 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 SLC45A3Q96JT2 553 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 PCYT2Q99447 389 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 SORT1Q99523 831 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 C2orf40Q9H1Z8 148 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 CXCL16Q9H2A7 254 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 R3HDMLQ9H3Y0 253 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 HOXC10Q9NYD6 342 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 WARS2Q9UGM6 360 aaKnown RBP9.37□□□□□ -0.91
OPTN-204ENST00000378752 ZDHHC2Q9UIJ5 367 aa9.37□□□□□ -0.91
OPTN-204ENST00000378752 RGSL1A5PLK6 1076 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 MAFO75444 373 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 ARIH2O95376 493 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 TFAP2AP05549 437 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 INSRRP14616 1297 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 PTPRAP18433 802 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 YAP1P46937 504 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 RPL14P50914 215 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 CDH13P55290 713 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 LDLRAP1Q5SW96 308 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SH2D5Q6ZV89 423 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 ANKRD23Q86SG2 305 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 DENND6AQ8IWF6 608 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 RNF168Q8IYW5 571 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 ZNF567Q8N184 647 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 FNIP1Q8TF40 1166 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 FCRL3Q96P31 734 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 UPF3AQ9H1J1 476 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.36□□□□□ -0.916e-6■■□□□ 12.6
OPTN-204ENST00000378752 GIMAP2Q9UG22 337 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 DSEQ9UL01 958 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 KIAA1217Q5T5P2 1943 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 HDAC3O15379 428 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 SUPT7LO94864 414 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 IQCF3P0C7M6 154 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 LMO2P25791 158 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 EPHX2P34913 555 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 GMPSP49915 693 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 MPP1Q00013 466 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 DCTN2Q13561 401 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 ZIK1Q3SY52 487 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 LDB1Q86U70 411 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 METTL25Q8N6Q8 603 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SPATA22Q8NHS9 363 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 FRMD8Q9BZ67 464 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 LRRC40Q9H9A6 602 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 TUBGCP4Q9UGJ1 667 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SFMBT1Q9UHJ3 866 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 AP4S1Q9Y587 144 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 NR5A2O00482 541 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 CCNT2O60583 730 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 RNASEH2AO75792 299 aaKnown RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 NFASCO94856 1347 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 NCAM1P13591 858 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 ARF4P18085 180 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 NFKB1P19838 968 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 L1CAMP32004 1257 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 MYBPC3Q14896 1274 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 SLC10A6Q3KNW5 377 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 CMPK2Q5EBM0 449 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 ZNF618Q5T7W0 954 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 ARHGAP17Q68EM7 881 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 KLC3Q6P597 504 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 NT5DC4Q86YG4 428 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 CPNE9Q8IYJ1 553 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 NXNL1Q96CM4 212 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 RMND5BQ96G75 393 aaPredicted RBP9.36□□□□□ -0.91
OPTN-204ENST00000378752 FAM96AQ9H5X1 160 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 DDIT4Q9NX09 232 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 RRN3Q9NYV6 651 aa9.36□□□□□ -0.91
OPTN-204ENST00000378752 ADGRA2Q96PE1 1338 aa9.35□□□□□ -0.91
OPTN-204ENST00000378752 BCLAF3A2AJT9 711 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms