RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PRPF39Q86UA1 669 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 OSTM1Q86WC4 334 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 LRRC49Q8IUZ0 686 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SDCCAG3Q96C92 435 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 CPNE1Q99829 537 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SH3GL3Q99963 347 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 THTPAQ9BU02 230 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GDAP2Q9NXN4 497 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 HAO1Q9UJM8 370 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ANGPTL2Q9UKU9 493 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ADGRA2Q96PE1 1338 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 AIM2O14862 343 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ADH1AP07327 375 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GRK2P25098 689 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 HOXA11P31270 313 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SMARCB1Q12824 385 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 LBRQ14739 615 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 TEX44Q53QW1 395 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ANKRD22Q5VYY1 191 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SERINC5Q86VE9 423 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 NIPA2Q8N8Q9 360 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 APBB2Q92870 758 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 C2orf49Q9BVC5 232 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GRHL1Q9NZI5 618 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 XYLBO75191 536 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 TRIM16O95361 564 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PARNO95453 639 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PCID2Q5JVF3 399 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 FAM182AQ5T1J6 154 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 ANGPTL8Q6UXH0 198 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 IRGQQ8WZA9 623 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 MIEF2Q96C03 454 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 Q9H521 79 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 STOML1Q9UBI4 398 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 KAT6AQ92794 2004 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 NCF1BA6NI72 391 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 NCF1CA8MVU1 366 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 GNGT2O14610 69 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 NRP1O14786 923 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 GNRH1P01148 92 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 ZCCHC18P0CG32 403 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 NCF1P14598 390 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 GABRR2P28476 465 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 CYP1B1Q16678 543 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 TTLL9Q3SXZ7 439 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 SPDYAQ5MJ70 313 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PRSS55Q6UWB4 352 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 ZCCHC23Q6ZST2 131 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC26A7Q8TE54 656 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 SNX19Q92543 992 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 ZNF75CPQ92670 426 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 BTN2A3PQ96KV6 586 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 ASAH2Q9NR71 780 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 CRYL1Q9Y2S2 319 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 THSD7AQ9UPZ6 1657 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PRR23AA6NEV1 266 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 HNRNPCL1O60812 293 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 HIC1Q14526 733 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 AGGF1Q8N302 714 aaeCLIP14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PHF21BQ96EK2 531 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM237Q96Q45 408 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 PTPRHQ9HD43 1115 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 CDYLQ9Y232 598 aa14.43□□□□□ -0.1
SHROOM1-203ENST00000378679 BCLAF3A2AJT9 711 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 A8MX80 341 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 L1CAMP32004 1257 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 NRLP54845 237 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 GDF10P55107 478 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 WNT3AP56704 352 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 KCNJ2P63252 427 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 GTF2H3Q13889 308 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 CRYMQ14894 314 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 MAPRE2Q15555 327 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 CST9Q5W186 159 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 GLT6D1Q7Z4J2 308 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 MTDHQ86UE4 582 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 TTC30BQ8N4P2 665 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 UCMAQ8WVF2 138 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 FOPNLQ96NB1 174 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 SYTL2Q9HCH5 934 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 NCKIPSDQ9NZQ3 722 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 SOCS7O14512 581 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 RBP1P09455 135 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 POU4F1Q01851 419 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 LPIN1Q14693 890 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 SGO1Q5FBB7 561 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 NSL1Q96IY1 281 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC9A7Q96T83 725 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 RGS18Q9NS28 235 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 DTLQ9NZJ0 730 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 A0A1B0GUL6 1792 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 PIRO00625 290 aa14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 NQO1P15559 274 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 IRX1P78414 480 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 SOX4Q06945 474 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-203ENST00000378679 ITIH4Q14624 930 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms