RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 NSL1Q96IY1 281 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 GLT1D1Q96MS3 346 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 VAT1Q99536 393 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 SAR1AQ9NR31 198 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 HCSTQ9UBK5 93 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 E9PAM4 449 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 MAFKO60675 156 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 PMPCBO75439 489 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 TADA2AO75478 443 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 TBX18O95935 607 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 IL1BP01584 269 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 COG7P83436 770 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 CDH17Q12864 832 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 NAB1Q13506 487 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 COLGALT2Q8IYK4 626 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 FAM193BQ96PV7 902 aaPredicted RBP19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 HAPLN3Q96S86 360 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 ACSS2Q9NR19 701 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 DNAJC16Q9Y2G8 782 aa19.6■□□□□ 0.73
PCDHA4-201ENST00000378125 ERI2A8K979 691 aaKnown RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 PROCP04070 461 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 SPRP35270 261 aaPredicted RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 SLC1A6P48664 564 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 NPY2RP49146 381 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 GATMP50440 423 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 BRMS1LQ5PSV4 323 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 TRAF7Q6Q0C0 670 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 SCML4Q8N228 414 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 MOCOSQ96EN8 888 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 FICDQ9BVA6 458 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 IL22Q9GZX6 179 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 THAP1Q9NVV9 213 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 KCNK4Q9NYG8 393 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 MYO16Q9Y6X6 1858 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 DNAJC6O75061 913 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 ENO1P06733 434 aaKnown RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 CCNCP24863 283 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 PAPOLAP51003 745 aaKnown RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 ZNF135P52742 658 aaPredicted RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 LIMK2P53671 638 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 RCN2Q14257 317 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 NAPEPLDQ6IQ20 393 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 RFWD3Q6PCD5 774 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 LBHD1Q9BQE6 289 aaPredicted RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 CADM1Q9BY67 442 aaKnown RBP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 ZCWPW1Q9H0M4 648 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 CATSPERBQ9H7T0 1116 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 RBM22Q9NW64 420 aaKnown RBP eCLIP19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 GMIPQ9P107 970 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 SOX13Q9UN79 622 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 SLC27A5Q9Y2P5 690 aa19.59■□□□□ 0.73
PCDHA4-201ENST00000378125 A0A096LPK6 155 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 HLA-DQB2P05538 268 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 HMBSP08397 361 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 ESRRAP11474 423 aaPredicted RBP19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 GM2AP17900 193 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 ARRB2P32121 409 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 AVPR1AP37288 418 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 DSC1Q08554 894 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 EFEMP1Q12805 493 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 MPP3Q13368 585 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 ITGA9Q13797 1035 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 PCSK7Q16549 785 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 VARS2Q5ST30 1063 aaKnown RBP19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 ARTNQ5T4W7 220 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 PIK3R6Q5UE93 754 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 TREML1Q86YW5 311 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 URGCPQ8TCY9 931 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 CD99L2Q8TCZ2 262 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 MAGEC3Q8TD91 643 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 TBL1YQ9BQ87 522 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 TRIM62Q9BVG3 475 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 PNPOQ9NVS9 261 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 SLC39A10Q9ULF5 831 aa19.58■□□□□ 0.73
PCDHA4-201ENST00000378125 NEBLO76041 1014 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 PBX3P40426 434 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 MIB1Q86YT6 1006 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 TTC8Q8TAM2 541 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 TACO1Q9BSH4 297 aaKnown RBP19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 GLOD4Q9HC38 313 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 CPSF2Q9P2I0 782 aaKnown RBP19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 COPG2Q9UBF2 871 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 NKX1-2Q9UD57 310 aaPredicted RBP19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 LNPEPQ9UIQ6 1025 aa19.58■□□□□ 0.72
PCDHA4-201ENST00000378125 THSD7BQ9C0I4 1608 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 TTC24A2A3L6 582 aaPredicted RBP19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 CYP2C18P33260 490 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 SERPINB8P50452 374 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 UBAP2LQ14157 1087 aaKnown RBP19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 CTXN3Q4LDR2 81 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 SWT1Q5T5J6 900 aaKnown RBP19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 MANEALQ5VSG8 457 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 FAM171A1Q5VUB5 890 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 SPNS2Q8IVW8 549 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 NUP93Q8N1F7 819 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 BTBD10Q9BSF8 475 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 OXCT2Q9BYC2 517 aaPredicted RBP19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 SLC2A6Q9UGQ3 507 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 ARHGEF37A1IGU5 675 aa19.57■□□□□ 0.72
PCDHA4-201ENST00000378125 KCNU1A8MYU2 1149 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms