RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MZT2BQ6NZ67 158 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NDST1P52848 882 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 GPR33Q49SQ1 333 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 MFSD14CQ5VZR4 134 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SRFBP1Q8NEF9 429 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 FAR1Q8WVX9 515 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PCBD2Q9H0N5 130 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 AFG3L2Q9Y4W6 797 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 MEI4A8MW99 385 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 RB1P06400 928 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SLCO1A2P46721 670 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 UXTQ9UBK9 157 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PCDHGB5Q9Y5G0 923 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SNAP25P60880 206 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZW10O43264 779 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 GPD2P43304 727 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 VEPH1Q14D04 833 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TJAP1Q5JTD0 557 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 DEDD2Q8WXF8 326 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PNMA5Q96PV4 448 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 RNF146Q9NTX7 359 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 UBXN8O00124 270 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CYBBP04839 570 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 LAMTOR4Q0VGL1 99 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF846Q147U1 533 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PAMR1Q6UXH9 720 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CPXCR1Q8N123 301 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 LRRC4CQ9HCJ2 640 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NGRNQ9NPE2 291 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 BMP2P12643 396 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 UNGP13051 313 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NMT1P30419 496 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PRKCEQ02156 737 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 BROXQ5VW32 411 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TCP10LQ8TDR4 215 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 DCAKDQ8WVC6 231 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NOL11Q9H8H0 719 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NWD1Q149M9 1564 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 INO80DQ53TQ3 878 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 GRAMD1CQ8IYS0 662 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 FAM111AQ96PZ2 611 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SCELO95171 688 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 AZIN2Q96A70 460 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PCDHGB6Q9Y5F9 930 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 UBAP1LF5GYI3 381 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SLC28A1O00337 649 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ODC1P11926 461 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF7P17097 686 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TCEA2Q15560 299 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NPY5RQ15761 445 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ABI1Q8IZP0 508 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 WNT8BQ93098 351 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 REXO2Q9Y3B8 237 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 FADS3Q9Y5Q0 445 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 EOMESO95936 686 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CAPGP40121 348 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 EMC2Q15006 297 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 C14orf105Q9NVL8 296 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 GABBR1Q9UBS5 961 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TPPPO94811 219 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ANPEPP15144 967 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 NDUFA9Q16795 377 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TINF2Q9BSI4 451 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CENPOQ9BU64 300 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PXMP2Q9NR77 195 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 STUB1Q9UNE7 303 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 VPS26AO75436 327 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 KLHL12Q53G59 568 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TSPYL5Q86VY4 417 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 IL31RAQ8NI17 732 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ADA2Q9NZK5 511 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 FBXL21Q9UKT6 434 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TARSP26639 723 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 DYNLL1P63167 89 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TRIP10Q15642 601 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZDHHC4Q9NPG8 344 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ENO1P06733 434 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 TALDO1P37837 337 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 HNRNPABQ99729 332 aaKnown RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CDH9Q9ULB4 789 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 AKT3Q9Y243 479 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 DPYSL4O14531 572 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SYTL5Q8TDW5 730 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 POLR3FQ9H1D9 316 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 SIRPGQ9P1W8 387 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 A0A088AWK7 358 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 AGR2O95994 175 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF10P21506 573 aaPredicted RBP5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ARL2P36404 184 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PLD1Q13393 1074 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CHI3L2Q15782 390 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 CCNYL2Q5T2Q4 361 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ACTR3BQ9P1U1 418 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF232Q9UNY5 417 aa5.02□□□□□ -1.61
PCDH9-201ENST00000377861 PRPS1L1P21108 318 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms