RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SLC9A7Q96T83 725 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TMEM120AQ9BXJ8 343 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 PTPRHQ9HD43 1115 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 RGS18Q9NS28 235 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 SNX10Q9Y5X0 201 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 NCF1BA6NI72 391 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 NCF1CA8MVU1 366 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 AGPSO00116 658 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 ANGPT2O15123 496 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TRIM13O60858 407 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TRIM16O95361 564 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 ANP32DO95626 131 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 ADH1AP07327 375 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 NCF1P14598 390 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 GDF10P55107 478 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TLE2Q04725 743 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 SPDYAQ5MJ70 313 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 UTP6Q9NYH9 597 aaKnown RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 PLA2G4CQ9UP65 541 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TLL2Q9Y6L7 1015 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 IQCF3P0C7M6 154 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TRABD2AQ86V40 505 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 CENPTQ96BT3 561 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 GBP5Q96PP8 586 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 SYBUQ9NX95 663 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 MYO9BQ13459 2157 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 DDX60LQ5H9U9 1706 aaKnown RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 DOCK2Q92608 1830 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 DDHD2O94830 711 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 RPL17P18621 184 aaKnown RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 ANKRD20A4Q4UJ75 823 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 NECAB2Q7Z6G3 386 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 SLC35B2Q8TB61 432 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 UCMAQ8WVF2 138 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 MRPL1Q9BYD6 325 aaKnown RBP14.76□□□□□ -0.05
TCOF1-202ENST00000377797 A0A1W2PPM1 405 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 TPP1O14773 563 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 SERPINE1P05121 402 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 SCTRP47872 440 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 AP2B1P63010 937 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 IL1RL1Q01638 556 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 OLFML1Q6UWY5 402 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 SERINC5Q86VE9 423 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 PHF21BQ96EK2 531 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.05
TCOF1-202ENST00000377797 TM6SF2Q9BZW4 377 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 ASAH2Q9NR71 780 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 DTLQ9NZJ0 730 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 CRYL1Q9Y2S2 319 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 MYADML2A6NDP7 307 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 PIRO00625 290 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 STAU1O95793 577 aaKnown RBP14.75□□□□□ -0.05
TCOF1-202ENST00000377797 HOXA11P31270 313 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-202ENST00000377797 WNT3AP56704 352 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 DTX3LQ8TDB6 740 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 AGO3Q9H9G7 860 aaKnown RBP14.75□□□□□ -0.05
TCOF1-202ENST00000377797 PKD2L2Q9NZM6 624 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 TRPC5OSA6NMA1 111 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 DGKIO75912 1065 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 CXCL14O95715 111 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 PIRTP0C851 137 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 ZNF132P52740 706 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 BCL2L1Q07817 233 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 DPYSL2Q16555 572 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 CCDC153Q494R4 210 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 SEL1L3Q68CR1 1132 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 TMEM40Q8WWA1 233 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 B3GALT6Q96L58 329 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 GLOD4Q9HC38 313 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 NRP1O14786 923 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 GPR32O75388 356 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 CLDN10P78369 228 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 TRIM32Q13049 653 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 C6orf10Q5SRN2 563 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 FNBP1LQ5T0N5 605 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 NCLNQ969V3 563 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 SH3GL2Q99962 352 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 NMRAL1Q9HBL8 299 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.75□□□□□ -0.05
TCOF1-202ENST00000377797 FBXW11Q9UKB1 542 aa14.75□□□□□ -0.05
TCOF1-202ENST00000377797 LAG3P18627 525 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 GABRR2P28476 465 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SGO1Q5FBB7 561 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 PRSS55Q6UWB4 352 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 KYAT3Q6YP21 454 aaKnown RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SPDL1Q96EA4 605 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 SLC40A1Q9NP59 571 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 FZD10Q9ULW2 581 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 FAM95CA0A1B0GW59 222 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 H2AFYO75367 372 aaKnown RBP14.74□□□□□ -0.05
TCOF1-202ENST00000377797 PROZP22891 400 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 CRABP2P29373 138 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 MORN1Q5T089 497 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 CERCAMQ5T4B2 595 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 ARMC12Q5T9G4 340 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
TCOF1-202ENST00000377797 MIPOL1Q8TD10 442 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms