RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ACOX2Q99424 681 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 GPR20Q99678 358 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NIFKQ9BYG3 293 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ELOVL6Q9H5J4 265 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ACTR8Q9H981 624 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SEPT3Q9UH03 358 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TCRBV9S1A1TA0A576 114 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 M0R2N6 131 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 RNASEH1O60930 286 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 VPS4BO75351 444 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 VCLP18206 1134 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NFKB1P19838 968 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 CRELD2Q6UXH1 353 aaPredicted RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 GLT6D1Q7Z4J2 308 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TSPAN18Q96SJ8 248 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SLC25A23Q9BV35 468 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 R3HDM2Q9Y2K5 976 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 YDJCA8MPS7 323 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ZNF7P17097 686 aaPredicted RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 FASP25445 335 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 OASLQ15646 514 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TREML2Q5T2D2 321 aa19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TSEN34Q9BSV6 310 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PTP4A2Q12974 167 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TSHZ1Q6ZSZ6 1077 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 OR56A4Q8NGH8 313 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 UROC1Q96N76 676 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 COL20A1Q9P218 1284 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 RAD51BO15315 384 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 BIRC5O15392 142 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KRT6AP02538 564 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KRT6BP04259 564 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KRT6CP48668 564 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ALDH6A1Q02252 535 aaKnown RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PAPOLBQ9NRJ5 636 aaKnown RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 UBA2Q9UBT2 640 aaPredicted RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ADAMTS3O15072 1205 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MYL4P12829 197 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 CHI3L1P36222 383 aaPredicted RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 RFX3P48380 749 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MRPS6P82932 125 aaKnown RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 VPS33AQ96AX1 596 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TBC1D10AQ9BXI6 508 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PCDH18Q9HCL0 1135 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 FAM58BPP0C7Q3 252 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NUP107P57740 925 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MAD2L1Q13257 205 aaPredicted RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 OR6Y1Q8NGX8 325 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MRPL9Q9BYD2 267 aaKnown RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 LRRC4CQ9HCJ2 640 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KRCC1Q9NPI7 259 aaPredicted RBP19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NUDT5Q9UKK9 219 aa19■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SLIT2O94813 1529 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SNUPNO95149 360 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 COL1A2P08123 1366 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SLC2A4P14672 509 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ARL2P36404 184 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ABCG1P45844 678 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 HADHBP55084 474 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MRPS5P82675 430 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KCTD19Q17RG1 926 aaPredicted RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PGS1Q32NB8 556 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MIER2Q8N344 545 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MARCH2Q9P0N8 246 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 KCNJ2P63252 427 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 NOMO1Q15155 1222 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 AGAP11Q8TF27 550 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 CLEC4DQ8WXI8 215 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 LGMNQ99538 433 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SNTNA6NMZ2 147 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 HSDL1Q3SXM5 330 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 LCLAT1Q6UWP7 414 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 FNIP1Q8TF40 1166 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 LENG9Q96B70 501 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 BBS2Q9BXC9 721 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PTCH2Q9Y6C5 1203 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TCRBV7S2A1N4TA0A589 114 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 CCNT2O60583 730 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 CCNB1P14635 433 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ATP6V1B2P21281 511 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PLK1P53350 603 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ENPEPQ07075 957 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 ANGPT1Q15389 498 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PDGFDQ9GZP0 370 aaPredicted RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 DHX33Q9H6R0 707 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SLCO1B3Q9NPD5 702 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 COMMD8Q9NX08 183 aa18.99■□□□□ 0.63
CNTNAP3B-203ENST00000377561 EDF1O60869 148 aaKnown RBP18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 MTA2O94776 668 aa18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 PAX3P23760 479 aa18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TUFMP49411 452 aaKnown RBP18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SAMD4BQ5PRF9 694 aaKnown RBP18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 GPR142Q7Z601 462 aa18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 XYLT1Q86Y38 959 aa18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 LRRC49Q8IUZ0 686 aa18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 SLC44A2Q8IWA5 706 aaPredicted RBP18.98■□□□□ 0.63
CNTNAP3B-203ENST00000377561 TOP6BLQ8N6T0 577 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms