RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 IL31Q6EBC2 164 aa21.77■■□□□ 1.08
CBWD3-202ENST00000377342 TTC27Q6P3X3 843 aa21.77■■□□□ 1.08
CBWD3-202ENST00000377342 RALGPS2Q86X27 583 aaPredicted RBP21.77■■□□□ 1.08
CBWD3-202ENST00000377342 AHI1Q8N157 1196 aa21.77■■□□□ 1.08
CBWD3-202ENST00000377342 ZNF419Q96HQ0 510 aaPredicted RBP21.77■■□□□ 1.08
CBWD3-202ENST00000377342 SPON2Q9BUD6 331 aa21.77■■□□□ 1.08
CBWD3-202ENST00000377342 RBM12Q9NTZ6 932 aaKnown RBP21.77■■□□□ 1.08
CBWD3-202ENST00000377342 IPO11Q9UI26 975 aaKnown RBP21.77■■□□□ 1.08
CBWD3-202ENST00000377342 MYO18AQ92614 2054 aaKnown RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PRRT4C9JH25 899 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PPP1R12AO14974 1030 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PHF2O75151 1096 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PEX11BO96011 259 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 SNX1Q13596 522 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 SLC45A4Q5BKX6 768 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 BZW1Q7L1Q6 419 aaKnown RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 GJD3Q8N144 294 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 EZH1Q92800 747 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 TSGA13Q96PP4 275 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 PNKPQ96T60 521 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 FRMD8P1Q9BZ68 369 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 C8orf33Q9H7E9 229 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-202ENST00000377342 ACTL7AQ9Y615 435 aa21.76■■□□□ 1.07
CBWD3-202ENST00000377342 CBX4O00257 560 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 KDELR3O43731 214 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 PRAMEF11O60813 436 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 CTSOP43234 321 aaPredicted RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 CKAP4Q07065 602 aaKnown RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 DMC1Q14565 340 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 DRICH1Q6PGQ1 229 aaPredicted RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 SPATA4Q8NEY3 305 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 WFIKKN2Q8TEU8 576 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 BDP1A6H8Y1 2624 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 GOLGA6L10A0A0M3HER8 536 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 H7C0C1 242 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 CD160O95971 181 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 ATP5OP48047 213 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 IL10RBQ08334 325 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 C2orf54Q08AI8 447 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 BYSLQ13895 437 aaKnown RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 FAM182AQ5T1J6 154 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 MBLAC2Q68D91 279 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 LEKR1Q6ZMV7 388 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 ZNF354CQ86Y25 554 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 LRRC49Q8IUZ0 686 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 CCNYQ8ND76 341 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 TFB1MQ8WVM0 346 aaKnown RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 P2RY13Q9BPV8 354 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 C2orf49Q9BVC5 232 aaPredicted RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 DDX47Q9H0S4 455 aaKnown RBP21.75■■□□□ 1.07
CBWD3-202ENST00000377342 SP110Q9HB58 689 aa21.75■■□□□ 1.07
CBWD3-202ENST00000377342 ANTXRLA6NF34 631 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 HACD1B0YJ81 288 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 KAT7O95251 611 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 GALK1P51570 392 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 CLCN6P51797 869 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 ZNF33AQ06730 810 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 SLC44A4Q53GD3 710 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 LINGO4Q6UY18 593 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 TPRG1Q6ZUI0 275 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 CDKL3Q8IVW4 592 aaPredicted RBP21.74■■□□□ 1.07
CBWD3-202ENST00000377342 CCDC13Q8IYE1 715 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 MAGOHBQ96A72 148 aaKnown RBP21.74■■□□□ 1.07
CBWD3-202ENST00000377342 TTC17Q96AE7 1141 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 BRD8Q9H0E9 1235 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 MUTYHQ9UIF7 546 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 ATG2BQ96BY7 2078 aa21.74■■□□□ 1.07
CBWD3-202ENST00000377342 BCLAF3A2AJT9 711 aaKnown RBP21.73■■□□□ 1.07
CBWD3-202ENST00000377342 CHRM1P11229 460 aaPredicted RBP21.73■■□□□ 1.07
CBWD3-202ENST00000377342 GLULP15104 373 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 CCNCP24863 283 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 RBL1P28749 1068 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 KCNJ1P48048 391 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 NRLP54845 237 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 GDF10P55107 478 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 AP1B1Q10567 949 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 MLF2Q15773 248 aaPredicted RBP21.73■■□□□ 1.07
CBWD3-202ENST00000377342 TJAP1Q5JTD0 557 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 SORCS1Q8WY21 1168 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 MAML1Q92585 1016 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 FATE1Q969F0 183 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 ACDQ96AP0 544 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 MSANTD3Q96H12 275 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 TMEM121Q9BTD3 319 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 USP29Q9HBJ7 922 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 HOMER3Q9NSC5 361 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 MUC3AQ02505 3323 aa21.73■■□□□ 1.07
CBWD3-202ENST00000377342 CCDC188H7C350 402 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 KCNK1O00180 336 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 ITGAVP06756 1048 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 COILP38432 576 aaPredicted RBP21.72■■□□□ 1.07
CBWD3-202ENST00000377342 GRIA2P42262 883 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 STK19P49842 368 aaPredicted RBP21.72■■□□□ 1.07
CBWD3-202ENST00000377342 ZBTB17Q13105 803 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 PON2Q15165 354 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 KCTD19Q17RG1 926 aaPredicted RBP21.72■■□□□ 1.07
CBWD3-202ENST00000377342 TMEM196Q5HYL7 178 aa21.72■■□□□ 1.07
CBWD3-202ENST00000377342 FSTL4Q6MZW2 842 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms