RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 NT5C3BQ969T7 300 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 PGAP3Q96FM1 320 aaPredicted RBP21.6■■□□□ 1.05
VSX1-201ENST00000376707 TBCBQ99426 244 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 C2orf49Q9BVC5 232 aaPredicted RBP21.6■■□□□ 1.05
VSX1-201ENST00000376707 KDM4CQ9H3R0 1056 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 GDF3Q9NR23 364 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 TMEM51Q9NW97 253 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 RALYQ9UKM9 306 aaKnown RBP21.6■■□□□ 1.05
VSX1-201ENST00000376707 SARDHQ9UL12 918 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 CFAP47Q6ZTR5 3102 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 A0A1W2PR77 199 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 WNT9AO14904 365 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 MCF2LO15068 1137 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 ALOX15BO15296 676 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 RTN2O75298 545 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 LSM8O95777 96 aaKnown RBP21.59■■□□□ 1.05
VSX1-201ENST00000376707 POM121L1PQ3SYA9 428 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 ALFQ53S48 1182 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 CCDC157Q569K6 752 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 PRPF39Q86UA1 669 aaKnown RBP21.59■■□□□ 1.05
VSX1-201ENST00000376707 XYLT1Q86Y38 959 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 PIP4K2CQ8TBX8 421 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 FAM131CQ96AQ9 280 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 STK33Q9BYT3 514 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 ANLNQ9NQW6 1124 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 FTSJ1Q9UET6 329 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 PPM1HQ9ULR3 514 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 FARP1Q9Y4F1 1045 aaPredicted RBP21.59■■□□□ 1.05
VSX1-201ENST00000376707 SNX10Q9Y5X0 201 aa21.59■■□□□ 1.05
VSX1-201ENST00000376707 GOLGA8SH3BPF8 625 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 LATO43561 262 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 PLRG1O43660 514 aaKnown RBP21.58■■□□□ 1.05
VSX1-201ENST00000376707 DKK1O94907 266 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 CNTN1Q12860 1018 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 ACBD5Q5T8D3 534 aaPredicted RBP21.58■■□□□ 1.05
VSX1-201ENST00000376707 NAPEPLDQ6IQ20 393 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 TMPRSS7Q7RTY8 843 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 NOP9Q86U38 636 aaKnown RBP21.58■■□□□ 1.05
VSX1-201ENST00000376707 GATAD2AQ86YP4 633 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 ATP11CQ8NB49 1132 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 CCDC114Q96M63 670 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 TAB2Q9NYJ8 693 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 HS3ST2Q9Y278 367 aa21.58■■□□□ 1.05
VSX1-201ENST00000376707 PLXNA2O75051 1894 aa21.58■■□□□ 1.04
VSX1-201ENST00000376707 F8VZ95 297 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 I6L893 689 aaPredicted RBP21.57■■□□□ 1.04
VSX1-201ENST00000376707 TLR4O00206 839 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 YKT6O15498 198 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 ITGAVP06756 1048 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 SRCP12931 536 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 MAT2AP31153 395 aaKnown RBP21.57■■□□□ 1.04
VSX1-201ENST00000376707 FLT3P36888 993 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 ARRB1P49407 418 aaPredicted RBP21.57■■□□□ 1.04
VSX1-201ENST00000376707 KRT31Q15323 416 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 C2CD6Q53TS8 623 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 AGBL4Q5VU57 503 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 TFAP2DQ7Z6R9 452 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 SETD3Q86TU7 594 aaPredicted RBP21.57■■□□□ 1.04
VSX1-201ENST00000376707 PROSER1Q86XN7 944 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 ZNF683Q8IZ20 524 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 C1orf74Q96LT6 269 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 CCDC86Q9H6F5 360 aaKnown RBP21.57■■□□□ 1.04
VSX1-201ENST00000376707 MPP6Q9NZW5 540 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 VPS51Q9UID3 782 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 CHD6Q8TD26 2715 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 TMEM131Q92545 1883 aa21.57■■□□□ 1.04
VSX1-201ENST00000376707 NYNRINQ9P2P1 1898 aaKnown RBP21.56■■□□□ 1.04
VSX1-201ENST00000376707 DRGXA6NNA5 263 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 SNAP91O60641 907 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 MT-CO1P00395 513 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 CAPNS1P04632 268 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 MMEP08473 750 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 NUDT1P36639 197 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 NXPH1P58417 271 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 C6orf118Q5T5N4 469 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 NAA35Q5VZE5 725 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 GALNT15Q8N3T1 639 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 MFSD2AQ8NA29 543 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 DCAF4L2Q8NA75 395 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 EPS8L1Q8TE68 723 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 CPA5Q8WXQ8 436 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 PSMB7Q99436 277 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 GANQ9H2C0 597 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 TMPRSS4Q9NRS4 437 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 DMTF1Q9Y222 760 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 KNL1Q8NG31 2342 aa21.56■■□□□ 1.04
VSX1-201ENST00000376707 E9PAM4 449 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 GOLGA6L22H0YM25 854 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 TAF4O00268 1085 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 SRGAP2O75044 1071 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 OR1E1P30953 314 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 NOMO3P69849 1222 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 SHBQ15464 509 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 TRIM69Q86WT6 500 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 SAP25Q8TEE9 199 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 CFAP57Q96MR6 1250 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 VPS16Q9H269 839 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 ANO10Q9NW15 660 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 FANCLQ9NW38 375 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 ARHGAP20Q9P2F6 1191 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms