RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PENKP01210 267 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CHRM3P20309 590 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CDK9P50750 372 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM139Q8IV31 216 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ZCCHC2Q9C0B9 1178 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 DUSP12Q9UNI6 340 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SLC37A4O43826 429 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ENTPD5O75356 428 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 LDOC1O95751 146 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SLC11A2P49281 568 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PDIA6Q15084 440 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 NKX2-3Q8TAU0 364 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ATG4AQ8WYN0 398 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 HAVCR1Q96D42 359 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CERS2Q96G23 380 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 AGAP3Q96P47 875 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SIK2Q9H0K1 926 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FBXO44Q9H4M3 255 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CISHQ9NSE2 258 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 INTS13Q9NVM9 706 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 BCLAF3A2AJT9 711 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ITGA10O75578 1167 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 MYBL2P10244 700 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PEPDP12955 493 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ITGB6P18564 788 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PHKG1Q16816 387 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FBXO43Q4G163 708 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ADGRD1Q6QNK2 874 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 IPMKQ8NFU5 416 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 MAGEA8P43361 318 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ANKS1BQ7Z6G8 1248 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ACOT12Q8WYK0 555 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SGTAO43765 313 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SGPL1O95470 568 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 NFE2Q16621 373 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PTF1AQ7RTS3 328 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 STK32CQ86UX6 486 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 GGA3Q9NZ52 723 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CCDC189A1A4V9 331 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 EPN2O95208 641 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TSPAN19P0C672 248 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ITGA4P13612 1032 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 NR4A1P22736 598 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CHI3L1P36222 383 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PTGES3Q15185 160 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SNX32Q86XE0 403 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 RIBC2Q9H4K1 309 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 COPS7BQ9H9Q2 264 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 RAB27AP51159 221 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PSME3P61289 254 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 MRPS22P82650 360 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SMTNL2Q2TAL5 461 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PAGE2BQ5JRK9 111 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SPATA19Q7Z5L4 167 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SERPINB11Q96P15 392 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 MKS1Q9NXB0 559 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 INVSQ9Y283 1065 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 GH1P01241 217 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PSMD4P55036 377 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 MPP1Q00013 466 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 INPP5FQ9Y2H2 1132 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 LTA4HP09960 611 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ALOX15P16050 662 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 BAG6P46379 1132 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CCT3P49368 545 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PYDC1Q8WXC3 89 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 EIF2B3Q9NR50 452 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ECE2O60344 883 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PLA2G6O60733 806 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 MTMR9Q96QG7 549 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TDRD1Q9BXT4 1180 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 GPR63Q9BZJ6 419 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 KLHL33A6NCF5 533 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TADA2AO75478 443 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ATF6P18850 670 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TIE1P35590 1138 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ACTR3P61158 418 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TMC7Q7Z402 723 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 FNDC5Q8NAU1 212 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 COLGALT1Q8NBJ5 622 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 TEFMQ96QE5 360 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CHST12Q9NRB3 414 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 RABL2AQ9UBK7 228 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CRLS1Q9UJA2 301 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 RABL2BQ9UNT1 228 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 DUOX1Q9NRD9 1551 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CAPZA2P47755 286 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ZFP69Q49AA0 526 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SCN4BQ8IWT1 228 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PRELID2Q8N945 189 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 SHC3Q92529 594 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms