RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZNF232Q9UNY5 417 aa6.72□□□□□ -1.33
UBR4-204ENST00000375254 STARD3Q14849 445 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 SYT15Q9BQS2 421 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 DGCR6LQ9BY27 220 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 FANCFQ9NPI8 374 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 MORF4L1Q9UBU8 362 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 NCKAP1Q9Y2A7 1128 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 RNASEH1O60930 286 aaKnown RBP6.71□□□□□ -1.33
UBR4-204ENST00000375254 GSTM1P09488 218 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 SEPHS1P49903 392 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 MYBPC1Q00872 1141 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 FSTL1Q12841 308 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 COLEC12Q5KU26 742 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 LRRC38Q5VT99 294 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 TTI2Q6NXR4 508 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 LINC00299Q6ZSB3 139 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 MYO1HQ8N1T3 1032 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 FBXL16Q8N461 479 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 OXR1Q8N573 874 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 ANKRD49Q8WVL7 239 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 C3orf49Q96BT1 292 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 EGFL8Q99944 293 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 RIBC2Q9H4K1 309 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 AHSPQ9NZD4 102 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 ARHGAP28Q9P2N2 729 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 STOMP27105 288 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 ZNF234Q14588 700 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 MTHFSDQ2M296 383 aaKnown RBP6.71□□□□□ -1.33
UBR4-204ENST00000375254 ANKFN1Q8N957 763 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 OR52K2Q8NGK3 314 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 DNAJB8Q8NHS0 232 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 ZNF486Q96H40 463 aaPredicted RBP6.71□□□□□ -1.33
UBR4-204ENST00000375254 PCDHGC3Q9UN70 934 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 USP12O75317 370 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 CD40LGP29965 261 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 FGL2Q14314 439 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 AMIGO1Q86WK6 493 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 TDRPQ86YL5 185 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 UBQLNLQ8IYU4 475 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 GDPD1Q8N9F7 314 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 CDC42EP4Q9H3Q1 356 aaKnown RBP6.71□□□□□ -1.33
UBR4-204ENST00000375254 KCNK13Q9HB14 408 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.33
UBR4-204ENST00000375254 PDE10AQ9Y233 779 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 PTPRGP23470 1445 aa6.71□□□□□ -1.33
UBR4-204ENST00000375254 OIP5O43482 229 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NUAK1O60285 661 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NDUFS2O75306 463 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 MYL9P24844 172 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 UQCRC1P31930 480 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NAPEPLDQ6IQ20 393 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ADGRG6Q86SQ4 1221 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ZNF567Q8N184 647 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CCDC32Q9BV29 185 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CLPBQ9H078 707 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 M0R233 179 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 TNFRSF10AO00220 468 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CLIC2O15247 247 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CD2P06729 351 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PGK2P07205 417 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 MNDAP41218 407 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 MATKP42679 507 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PPP1R18Q6NYC8 613 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FAM199XQ6PEV8 388 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 STOML3Q8TAV4 291 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PIGKQ92643 395 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 DPF2Q92785 391 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 SLC35C2Q9NQQ7 365 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CDH7Q9ULB5 785 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 KIAA1257Q9ULG3 409 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OR6C70A6NIJ9 312 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 MSH4O15457 936 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 MTX3Q5HYI7 312 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PAMR1Q6UXH9 720 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FBXO11Q86XK2 927 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CAMKK1Q8N5S9 505 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FAM71DQ8N9W8 422 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OSBPL7Q9BZF2 842 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ADAMTS10Q9H324 1103 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 HPF1Q9NWY4 346 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NYAP2Q9P242 653 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PIGBOS1A0A0B4J2F0 54 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 EFCAB9A8MZ26 197 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 XRCC1P18887 633 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 PPP2R2DQ66LE6 453 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OTOAQ7RTW8 1153 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OR8K5Q8NH50 307 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 TCEAL4Q96EI5 215 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ADI1Q9BV57 179 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 RIOK2Q9BVS4 552 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 DFFAO00273 331 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 RB1P06400 928 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 HMBSP08397 361 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 AKR1C8PQ5T2L2 129 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OR5T1Q8NG75 326 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ROPN1LQ96C74 230 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms