RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 VARS2Q5ST30 1063 aaKnown RBP18.65■□□□□ 0.58
RXRB-202ENST00000374685 TNS4Q8IZW8 715 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 DBF4BQ8NFT6 615 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 OSBPL1AQ9BXW6 950 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 SLC39A8Q9C0K1 460 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 GBA3Q9H227 469 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 GMIPQ9P107 970 aa18.65■□□□□ 0.58
RXRB-202ENST00000374685 INHAP05111 366 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 CCNB1P14635 433 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 TSC2P49815 1807 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 ITKQ08881 620 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 PNPLA1Q8N8W4 532 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 HDAC11Q96DB2 347 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 C20orf27Q9GZN8 174 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 RGS18Q9NS28 235 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 IARS2Q9NSE4 1012 aaKnown RBP18.64■□□□□ 0.58
RXRB-202ENST00000374685 RRN3Q9NYV6 651 aa18.64■□□□□ 0.58
RXRB-202ENST00000374685 UNC5CO95185 931 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 NMBRP28336 390 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 AIF1P55008 147 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 NOGQ13253 232 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 MGAT5BQ3V5L5 792 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 ALYREFQ86V81 257 aaKnown RBP18.64■□□□□ 0.57
RXRB-202ENST00000374685 CIR1Q86X95 450 aaPredicted RBP18.64■□□□□ 0.57
RXRB-202ENST00000374685 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
RXRB-202ENST00000374685 TTC16Q8NEE8 873 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 TET1Q8NFU7 2136 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 SF3B1O75533 1304 aaKnown RBP eCLIP18.64■□□□□ 0.577e-6■■■■■ 28.7
RXRB-202ENST00000374685 SKIP12755 728 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 MAXP61244 160 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 NIPAL4Q0D2K0 466 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 PSMD5Q16401 504 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 AGR3Q8TD06 166 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 IRGQQ8WZA9 623 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 MTBPQ96DY7 904 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 TEKT5Q96M29 485 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 LRRC40Q9H9A6 602 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 PCDHB8Q9UN66 801 aa18.64■□□□□ 0.57
RXRB-202ENST00000374685 TNFRSF10BO14763 440 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 NCAM2O15394 837 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 UPP2O95045 317 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 CPA2P48052 419 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 SERPINB9P50453 376 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 ITPRIPL1Q6GPH6 555 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 COLGALT2Q8IYK4 626 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 ACVR1CQ8NER5 493 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 MOCOSQ96EN8 888 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 UROC1Q96N76 676 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 EIF2B3Q9NR50 452 aaKnown RBP18.63■□□□□ 0.57
RXRB-202ENST00000374685 GSTA2P09210 222 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 ATN1P54259 1190 aaPredicted RBP18.63■□□□□ 0.57
RXRB-202ENST00000374685 SEPT6Q14141 434 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 ANKRD20A4Q4UJ75 823 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 FASTKD1Q53R41 847 aaKnown RBP18.63■□□□□ 0.57
RXRB-202ENST00000374685 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 DCLK2Q8N568 766 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 SLC25A41Q8N5S1 370 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 GIPC2Q8TF65 315 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 ATP2A3Q93084 1043 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 PABPC5Q96DU9 382 aaKnown RBP18.63■□□□□ 0.57
RXRB-202ENST00000374685 KLHL5Q96PQ7 755 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 RBM22Q9NW64 420 aaKnown RBP eCLIP18.63■□□□□ 0.57
RXRB-202ENST00000374685 HS3ST4Q9Y661 456 aa18.63■□□□□ 0.57
RXRB-202ENST00000374685 CST5P28325 142 aaPredicted RBP18.62■□□□□ 0.57
RXRB-202ENST00000374685 AVPR1AP37288 418 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 CHRNA4P43681 627 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 HTRA3P83110 453 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 MARK2Q7KZI7 788 aaKnown RBP18.62■□□□□ 0.57
RXRB-202ENST00000374685 SH3TC2Q8TF17 1288 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 NAF1Q96HR8 494 aaKnown RBP18.62■□□□□ 0.57
RXRB-202ENST00000374685 FICDQ9BVA6 458 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 DPPA5A6NC42 116 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 E9PAM4 449 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 SMIM24O75264 130 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 HCAR3P49019 387 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 PRPSAP1Q14558 356 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 CLNKQ7Z7G1 428 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 CHSY1Q86X52 802 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 SCLYQ96I15 445 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 TXLNGQ9NUQ3 528 aa18.62■□□□□ 0.57
RXRB-202ENST00000374685 ALDH1A2O94788 518 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 PYGLP06737 847 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 IRF9Q00978 393 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 KCNMB4Q86W47 210 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 ARHGAP12Q8IWW6 846 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 B4GALNT2Q8NHY0 566 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 RILPQ96NA2 401 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 FAM167BQ9BTA0 163 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 CREBZFQ9NS37 354 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 TMEM216Q9P0N5 145 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 MTO1Q9Y2Z2 717 aaKnown RBP18.61■□□□□ 0.57
RXRB-202ENST00000374685 ASB3Q9Y575 518 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 C2CD2LO14523 706 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 PQBP1O60828 265 aaKnown RBP18.61■□□□□ 0.57
RXRB-202ENST00000374685 CNTN5O94779 1100 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 RPLP2P05387 115 aaKnown RBP18.61■□□□□ 0.57
RXRB-202ENST00000374685 CRHR1P34998 444 aa18.61■□□□□ 0.57
RXRB-202ENST00000374685 ETFBP38117 255 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms