RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IL22Q9GZX6 179 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RNF19AQ9NV58 838 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 SOX13Q9UN79 622 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ANKRD6Q9Y2G4 727 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CDY2AQ9Y6F7 541 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CDY1Q9Y6F8 540 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 F5H423 210 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DLL1O00548 723 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 FYNP06241 537 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 SRGAP2BP0DMP2 458 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ERVK-10P10266 1014 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RPL9P32969 192 aaKnown RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 HTR7P34969 479 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 NDUFV1P49821 464 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 TUBB3Q13509 450 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 KCNA10Q16322 511 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 LRRC26Q2I0M4 334 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ANKRD20A4Q4UJ75 823 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 FSCBQ5H9T9 825 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 NAPEPLDQ6IQ20 393 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 IRGCQ6NXR0 463 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 HFE2Q6ZVN8 426 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RNF180Q86T96 592 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 LINC00523Q86TU6 105 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DCLK2Q8N568 766 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DNAAF3Q8N9W5 541 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 KLHDC9Q8NEP7 349 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 RDH11Q8TC12 318 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 STON2Q8WXE9 905 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 SMARCD1Q96GM5 515 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 SMOQ99835 787 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 ZNF395Q9H8N7 513 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-203ENST00000374490 CHST12Q9NRB3 414 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 NMRK1Q9NWW6 199 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DDIT4Q9NX09 232 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 DONSONQ9NYP3 566 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 LRCH1Q9Y2L9 728 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PCDHB12Q9Y5F1 795 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 TRPV2Q9Y5S1 764 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PSAT1Q9Y617 370 aa14.23□□□□□ -0.13
HMGCL-203ENST00000374490 PRR5-ARHGAP8B1AHC4 643 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 NRP1O14786 923 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 MAP3K7O43318 606 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 FKBP6O75344 327 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMGCL-203ENST00000374490 MLH1P40692 756 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 CPA2P48052 419 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 CXCR3P49682 368 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 ACTR3P61158 418 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 ARHGAP8P85298 464 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 THOC5Q13769 683 aaKnown RBP14.22□□□□□ -0.13
HMGCL-203ENST00000374490 GDF6Q6KF10 455 aaPredicted RBP14.22□□□□□ -0.13
HMGCL-203ENST00000374490 AAGABQ6PD74 315 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 BEND5Q7L4P6 421 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 STRA8Q7Z7C7 330 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 C10orf107Q8IVU9 208 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 ULK2Q8IYT8 1036 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 OR6Y1Q8NGX8 325 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 WDR60Q8WVS4 1066 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 TSGA13Q96PP4 275 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 LBHD1Q9BQE6 289 aaPredicted RBP14.22□□□□□ -0.13
HMGCL-203ENST00000374490 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 TMPRSS4Q9NRS4 437 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 TMEM216Q9P0N5 145 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 SLC17A6Q9P2U8 582 aa14.22□□□□□ -0.13
HMGCL-203ENST00000374490 TRIP11Q15643 1979 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 ZCWPW2A0A1B0GU75 182 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 YJEFN3A6XGL0 299 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 KCNK1O00180 336 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 ZBTB24O43167 697 aaPredicted RBP14.21□□□□□ -0.13
HMGCL-203ENST00000374490 ITM2AO43736 263 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 CABYRO75952 493 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 PRKCGP05129 697 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 THP07101 528 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 NCAM1P13591 858 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 KCNA4P22459 653 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 POLD2P49005 469 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 AP2B1P63010 937 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 KDSRQ06136 332 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 MPP3Q13368 585 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 METTL21CQ5VZV1 264 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 ARMC3Q5W041 872 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 TRIM68Q6AZZ1 485 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 DCLRE1AQ6PJP8 1040 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 CLEC14AQ86T13 490 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 KLHDC8BQ8IXV7 354 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 CMTM5Q96DZ9 223 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 ZNF778Q96MU6 729 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 FCRL3Q96P31 734 aaPredicted RBP14.21□□□□□ -0.13
HMGCL-203ENST00000374490 SORT1Q99523 831 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 GORASP1Q9BQQ3 440 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 EBF4Q9BQW3 602 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 COLEC11Q9BWP8 271 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 OSBPL1AQ9BXW6 950 aa14.21□□□□□ -0.13
HMGCL-203ENST00000374490 SENP6Q9GZR1 1112 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms