RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 TMEM237Q96Q45 408 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 VAT1Q99536 393 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 LRRC40Q9H9A6 602 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SLC17A6Q9P2U8 582 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 DLDP09622 509 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 YWHAHQ04917 246 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 OLIG2Q13516 323 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 PRPSAP1Q14558 356 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SPDYAQ5MJ70 313 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF689Q96CS4 500 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 CERS2Q96G23 380 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 CELF6Q96J87 481 aaKnown RBP12.35□□□□□ -0.43
HMGCL-202ENST00000374487 SUSD3Q96L08 255 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 TMEM120AQ9BXJ8 343 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 GBA3Q9H227 469 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 IL1RAPL1Q9NZN1 696 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
HMGCL-202ENST00000374487 ARHGAP42A6NI28 874 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 BIRC5O15392 142 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 CBX6O95503 412 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 IL1BP01584 269 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 JCHAINP01591 159 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 ITGB1P05556 798 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 ITGA2BP08514 1039 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 PBX3P40426 434 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 IRX4P78413 519 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 FAM189BP81408 668 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 COG7P83436 770 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 BST1Q10588 318 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 CLLU1OSQ5K130 101 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 GLB1LQ6UWU2 654 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 KYAT3Q6YP21 454 aaKnown RBP12.34□□□□□ -0.43
HMGCL-202ENST00000374487 SCML4Q8N228 414 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 MAGEC3Q8TD91 643 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 INPP5DQ92835 1189 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 TBC1D31Q96DN5 1066 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 SIRPGQ9P1W8 387 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 KANSL3Q9P2N6 904 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 PCDHB7Q9Y5E2 793 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 PSAT1Q9Y617 370 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
HMGCL-202ENST00000374487 TTC3P53804 2025 aa12.34□□□□□ -0.43
HMGCL-202ENST00000374487 F8W810 466 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 DFFAO00273 331 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TPP1O14773 563 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 ALDOAP04075 364 aaKnown RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 BPGMP07738 259 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 MYL2P10916 166 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 NFKB1P19838 968 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF669Q96BR6 464 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 C7orf26Q96N11 449 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 OSBPL2Q9H1P3 480 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 KCNK13Q9HB14 408 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 DCDC2Q9UHG0 476 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 MAGED2Q9UNF1 606 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 SPTBN5Q9NRC6 3674 aaKnown RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 FAM237BA0A1B0GVD1 139 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 ATP9BO43861 1147 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 GLRA3O75311 464 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 HAUS5O94927 633 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TOP3BO95985 862 aaKnown RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 T-ENOLP0DO92 83 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TYMPP19971 482 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 SERPINB3P29508 390 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 TYK2P29597 1187 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 CCR1P32246 355 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 CD68P34810 354 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 GP5P40197 560 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 SLC5A3P53794 718 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 BEND5Q7L4P6 421 aa12.33□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.44
HMGCL-202ENST00000374487 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms