RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 SEPT4O43236 478 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 PGAM1P18669 254 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 SERPINB9P50453 376 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 SEMG2Q02383 582 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
NCDN-203ENST00000373253 SLC9A4Q6AI14 798 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 CLNKQ7Z7G1 428 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 CATSPERBQ9H7T0 1116 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 DERAQ9Y315 318 aa13.45□□□□□ -0.26
NCDN-203ENST00000373253 NEMP2A6NFY4 417 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 PRR5-ARHGAP8B1AHC4 643 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 CCDC22O60826 627 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 HNRNPLP14866 589 aaKnown RBP eCLIP13.44□□□□□ -0.269e-14■■■■□ 26
NCDN-203ENST00000373253 PGFP49763 221 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 ARHGAP8P85298 464 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 FOXD4Q12950 439 aaPredicted RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 TSTA3Q13630 321 aaPredicted RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 KPNB1Q14974 876 aaKnown RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 TRIM67Q6ZTA4 783 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 SLC2A6Q9UGQ3 507 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 PLLPQ9Y342 182 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 STARD13Q9Y3M8 1113 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 PRRG1O14668 218 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 ALDH7A1P49419 539 aaKnown RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 GALNT3Q14435 633 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 INTS6LQ5JSJ4 861 aaKnown RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 AGGF1Q8N302 714 aaeCLIP13.44□□□□□ -0.261e-7■■■■■ 30.8
NCDN-203ENST00000373253 RSPH1Q8WYR4 309 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 NPY6RQ99463 290 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 MUC3BQ9H195 1237 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 TYROBPO43914 113 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 EPHA3P29320 983 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 GRAMD1BQ3KR37 738 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 MARC1Q5VT66 337 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 C14orf80Q86SX3 495 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 DCP1BQ8IZD4 617 aaKnown RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 ARHGAP24Q8N264 748 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 USP13Q92995 863 aaPredicted RBP13.44□□□□□ -0.26
NCDN-203ENST00000373253 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 VPS39Q96JC1 886 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
NCDN-203ENST00000373253 SMAPO00193 183 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 C2P06681 752 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 ITGB6P18564 788 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CDH17Q12864 832 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 BNIP1Q12981 228 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 LPIN1Q14693 890 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 ANKRD20A4Q4UJ75 823 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CYP4V2Q6ZWL3 525 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 TMEM86AQ8N2M4 240 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 TEX9Q8N6V9 391 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 SLC39A8Q9C0K1 460 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 BPIFA1Q9NP55 256 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 FAM50BQ9Y247 325 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CDY1Q9Y6F8 540 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 EME2A4GXA9 379 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 PRPF4O43172 522 aaKnown RBP eCLIP13.43□□□□□ -0.26
NCDN-203ENST00000373253 GLRA3O75311 464 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 KCNE1P15382 129 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 WARSP23381 471 aaKnown RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 WEE1P30291 646 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 OCRLQ01968 901 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 PDE1CQ14123 709 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 FSTL4Q6MZW2 842 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 PLD6Q8N2A8 252 aaKnown RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 DCBLD1Q8N8Z6 715 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 STK32AQ8WU08 396 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CATSPER2Q96P56 530 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 NMUR1Q9HB89 426 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 GDAP2Q9NXN4 497 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 MBLAC1A4D2B0 266 aaPredicted RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 GCATO75600 419 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CNTN5O94779 1100 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 SUPT7LO94864 414 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 YWHAQP27348 245 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 CTGFP29279 349 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 PAPOLAP51003 745 aaKnown RBP13.43□□□□□ -0.26
NCDN-203ENST00000373253 DSC2Q02487 901 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 WASHC5Q12768 1159 aa13.43□□□□□ -0.26
NCDN-203ENST00000373253 MORN1Q5T089 497 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms